Gene Ent638_3389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEnt638_3389 
Symbol 
ID5112374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEnterobacter sp. 638 
KingdomBacteria 
Replicon accessionNC_009436 
Strand
Start bp3694526 
End bp3695101 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content56% 
IMG OID640493594 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001178100 
Protein GI146313026 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.826667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATGGC GAAATATGGA TAACGTTTTT GCGCCGCGCG AAGCATGGCC CGCGCTGATG 
GTAAAAGCCC AGGCGGGGGA TCGTGACGCG TATACGCAGC TACTGCGCGC CATCGTTCCG
GCGATCCGGG CGATAGTGCG CAAACAGGTG TCCGATCCGG TGTTGGTCGA AGATGTCATT
CAGGATGTCC TTTTGACGGT CCATCGGGTG CGCCATACCT ACGACCCCGC CTGTCCTTTT
TTGCCGTGGC TGATGGCGAT TTCGCAGGCC CGAGCGATCG ATGCGCTTCG CCATCGCGGA
CGCTCTCAGC GACGGGAAAC GACAGCCGAT GCCTCGTTAT CGGAATATGC TGCGCGGGAT
GATTCAGAAC ATCAGGACAT TCAGGAAGAG CTGTCGCGCA TATTAGACCG GCTGCCTTCT
CGTCAGCGTC AGATTGTGCA GCATATCCAT CTCGAGGAAA TGACGCTCGC CGAGGCCGCT
AAGCGCCATA ACCTGAGCCT CTCAGCCGTG AAATCTTTAT TACACAGAGC ATTAACGAAT
CTTCGCCGGA TGGGAGCGAA TCATGACCAA TCATGA
 
Protein sequence
MSWRNMDNVF APREAWPALM VKAQAGDRDA YTQLLRAIVP AIRAIVRKQV SDPVLVEDVI 
QDVLLTVHRV RHTYDPACPF LPWLMAISQA RAIDALRHRG RSQRRETTAD ASLSEYAARD
DSEHQDIQEE LSRILDRLPS RQRQIVQHIH LEEMTLAEAA KRHNLSLSAV KSLLHRALTN
LRRMGANHDQ S