| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_3216 |
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| Symbol | truD |
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| ID | 5112930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Enterobacter sp. 638 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009436 |
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| Strand | - |
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| Start bp | 3502870 |
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| End bp | 3503919 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640493420 |
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| Product | tRNA pseudouridine synthase D |
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| Protein accession | YP_001177931 |
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| Protein GI | 146312857 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.285215 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGT TTGAGAATCT GACCTGGCTG CACGGAAAAC CGCAGGGCAA TGGCCTGCTA
AAAGCCAATC CTGAAGATTT CGTGGTGGTA GAAGATTTGG GTTTTGAGCC TGACGGTGAG
GGTGAACACA TCCTCGTGCG TATTTTGAAA AATGGCTGTA ACACCCGTTT TGTCGCCGAC
GCGCTCGCGA AATTCCTTAA AATCCACGCC CGCGAAGTGA GTTTTGCTGG TCAGAAAGAC
AAACACGCCG TAACGGAACA GTGGCTTTGC GCCCGCGTTC CCGGCAACGC AATGCCTGAT
TTGAGCCAAT TTGAGCTTGA AGGCTGTAAA GTGCTGGAAT ATGCCCGGCA TAAGCGCAAG
CTGCGTTTAG GCGCGCTCCA GGGCAATGCT TTCACTTTGA TTCTGCGCGA TGTGACAGAT
CGTGACGACG TCGAAAAACG CCTGGCCGCA ATCGCGGAGC AGGGCGTGCC GAACTACTTC
GGCGCACAAC GTTTCGGTAT CGGCGGCAGT AATTTGCTGG GTGCGCTGCG CTGGGCGCAA
AGCGATGCGC CGGTGCGTGA CAGGAATAAG CGCAGTTTTT GGTTGTCTGC GGCCCGCAGT
GCGTTGTTTA ATCAGATTGT GAGTGAACGG CTGAAAAAAC CGGACGCGAA TCAAGTTGTT
GTCGGCGATG CGCTACAATT AGCGGGACGC GGCAGTTGGT TTGTGGCCAC GGCGGAAGAA
ATAACCGATG TACAGACGCG CGTCGATAAT AAAACGCTGA TGATTACCGC CGCGATGCCC
GGCTCGGGAG AGTGGGGCAC GCAGGCCGAT GCGCTCGCGG CTGAACAGGC GGCGATTGCG
GATGCGCCAG AATTACAATC ATTGCTGATG CGGGAGAAAG TTGAGGCGGC GCGCCGTGCG
ATGCTGCTCT ATCCGCAGAA GCTTAGCTGG AACTGGTGGG ACGACGTGAC CGTCGAGTTA
CGCTTCTGGC TACCGGCAGG TAGCTTCGCC ACCAGCGTTG TCAGGGAACT TATCAACACC
TCGGGTGATT ATGCGAATAT TGCTGAGTAA
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| Protein sequence | MTAFENLTWL HGKPQGNGLL KANPEDFVVV EDLGFEPDGE GEHILVRILK NGCNTRFVAD
ALAKFLKIHA REVSFAGQKD KHAVTEQWLC ARVPGNAMPD LSQFELEGCK VLEYARHKRK
LRLGALQGNA FTLILRDVTD RDDVEKRLAA IAEQGVPNYF GAQRFGIGGS NLLGALRWAQ
SDAPVRDRNK RSFWLSAARS ALFNQIVSER LKKPDANQVV VGDALQLAGR GSWFVATAEE
ITDVQTRVDN KTLMITAAMP GSGEWGTQAD ALAAEQAAIA DAPELQSLLM REKVEAARRA
MLLYPQKLSW NWWDDVTVEL RFWLPAGSFA TSVVRELINT SGDYANIAE
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