| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_0403 |
|---|
| Symbol | |
|---|
| ID | 5113573 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Enterobacter sp. 638 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009436 |
|---|
| Strand | + |
|---|
| Start bp | 455824 |
|---|
| End bp | 458331 |
|---|
| Gene Length | 2508 bp |
|---|
| Protein Length | 835 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640490571 |
|---|
| Product | fimbrial biogenesis outer membrane usher protein |
|---|
| Protein accession | YP_001175142 |
|---|
| Protein GI | 146310068 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3188] P pilus assembly protein, porin PapC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAATA CATACATTAA TAAAAAGTGC ACAAAGACCC TAGTGGCAAA ATGGTCTGTA
CTTGCAATTT GTGTTTGCGC AGGTATGCGC GCCCCAGCGA TGGCAGCAGA TGATATTCAG
TTTAATACCG ATGTTCTGGA TGTTAAAGAT AAAGCAAATA TCGACCTAAG CCAATTTTCT
AAACGCGGCT ATATTATGCC GGGTGAATAC ACCTTCCAAA TTAAAATTAA CCAAAACGAA
TTGGAAGAGC AGAATATTTC GGTATATCCA TCACCATTAG ATAAGAATAA TACTATTGCG
TGTTTATCAC CGGCGCTGGT CAAGAAGTTT GGTTTTAAAG ATAAATTTCT TAACCAGCTT
CAGTCCTGGC AGAACGGGGA GTGCTTAGAT GTTGCCGCGC TAAAAGGTGT AGAGATCACT
CCGGATTTAG GTGCGAGCAC ACTCGTTATC AACATGCCGC AGGCATATCT CGAATACACC
TCGAATGATT GGGTTCCCGC TTCAATGTGG GACGAAGGTA TTCCTGGCCT GCTGGCGGAT
TATAACGTCA ACGCCCAGGC TCGTCACAAT GAGCAAGGTG GTGATTCAAA TACCGTATCC
GGCAACGGAA CATTTGGCGC CAACCTTGGT GCATGGCGTG CGCGTGCTGA CTGGCAGACC
AACTACGACC AAAACAGTGA CGAAAACAGC AGTGGGCAGA AGCAGTGGAC CTGGAGCCGC
ATGTATCTTT ATCGCGCGTT GAAACCGATC AAAGCGAAGC TGACACTCGG GGAAGATTAC
GTCAGTTCAG ATCTGTTCGA CAGCTTCCGC TTTGTGGGCG CAAGCGTGAT CTCCGATGAC
AATATGCTGC CGCCTAATCT TCGTGGCTAT GCTCCAGAAG TAACTGGCGT GGCAAAAACC
AACGCCAAAG TGACCATCTC CCAACAGGGA CGCGTGCTCT ATGAAACGCA GGTTGCTGCA
GGGCCGTTTG CGATTCAGGA CCTGAACAGC GCGGTAGCGG GTGAACTTGA TGTGCGTGTT
CAAGAGCAAG ATGGCTCCGT GCAGGAATAT AAAGTCAATA CGGCCAATAT TCCGTATCTG
ACGCGCCCAG GCAGCGTTCG CTACAAGTTT TATGCGGGTA AACCCGTCGG CTACGATCAC
AAGACGGACG GTGACACCTT CGGAACCGCC GAGTTCTCTT GGGGGATCAG CAACGGTTGG
TCGCTTTATG GCGGCATGGT TTCAAGCTCG AAATACATTT CTCTTGCAGC TGGTATTGGC
CGCGACCTGA TGGCGCTTGG CGCGTTGGCG TTCGACGTCA CGCGTTCCGA TGCAAAACTT
GAAGATGAGC ATCGCTCTGG TCAGTCGTAC CGAGTGAGTT ACTCAAAGCG CTTTGATGAC
ACGGGGAGTC AGGTGACCTT CGCAGGCTAC CGTTTCTCTG AAAAAGACTT TATGAGCTTC
TCGGATTACG TGAGCTATCG CGCTGACAAC GGTGATGTCA TGCAAAGCAA AGAGATGTAC
ACCGTCACCT TCAGCCAGCA ATTCAAGGCG CTGGGACTGA GTGCATACGC TAACTACTCG
CATCAGACCT ATTGGAATAG TGCGGCCGAA GATCGCTATA GCGTGTCGCT GTCTCGCTAT
TTCGATATCG GAAAATGGAA AAATATCAGC ACATCGCTAA CGGCATATCG CAATAAATTT
AACGGTGTCA ATGACGACGG GATGTATCTG TCGTTCTCCA TTCCTTGGGG CGACTCCGGC
ACGTTGGGGA TGAACTCGTC ATTTAACGGT GATGCCAGTA GCCACAACCT GAGCTACTAC
GACCGTCTGG ACAATGGCGA CAATTACCGC GTCGCAGCCG GTGGCACTAA CGACGGCGGC
TCACTCAGTG GTTACTACGA CCACCTTGGC GATGCGGCGG AAGTGACCGG CAACGTTGAC
TACCAGCATG GCCAATACAG TTCGACAGGC CTGAGTCTAC GCGGCGGTAT GACTGCCACC
ACGAAGGGGG CGGCGCTGCA CCGTTCGAAT GTACCAGGTG GCAGCCGCGT GTTGCTGGAC
ACTGGCGACG CGGCGGATGT GCCAGTGAAG GGCTATAGCG GCAATACGGC AACCAACCGA
TTCGGCAAAG CAGTCGTCAC AGAAGTGAGC GACTACAACA AAAACAGCCT GAGCATCGAC
ATCAACAAGT TGCCGGATAA CGCAGAGGCG ACCACCTCGG TAGTGCAGGC GACGCTGACT
GAAGGGGCCA TTGGCTATCG TCGGTTCAAC GTGCTCTCAG GTCAGAAGGC AATGGCAATC
ATCAGTCTGA AAGATAGCAG CCATCCTCCG TTTGGGGCGA GCGTGCGCAA TGCTGAGAAT
CAGGAAGTCG GCCTTGTCAA CGATGAGGGG CAAGCCTATC TCAGCGGCCT GAAGCCAGGC
GCTAAATTGA ATGTGAACTG GAATGGAACG ACACAGTGTG CCGTTACTGT ACCGGAAAAA
CTAACAGGAC TAAGTCAGAA CGGAAATCTG TTACTGCCGT GCCAGTAA
|
|---|
| Protein sequence | MVNTYINKKC TKTLVAKWSV LAICVCAGMR APAMAADDIQ FNTDVLDVKD KANIDLSQFS
KRGYIMPGEY TFQIKINQNE LEEQNISVYP SPLDKNNTIA CLSPALVKKF GFKDKFLNQL
QSWQNGECLD VAALKGVEIT PDLGASTLVI NMPQAYLEYT SNDWVPASMW DEGIPGLLAD
YNVNAQARHN EQGGDSNTVS GNGTFGANLG AWRARADWQT NYDQNSDENS SGQKQWTWSR
MYLYRALKPI KAKLTLGEDY VSSDLFDSFR FVGASVISDD NMLPPNLRGY APEVTGVAKT
NAKVTISQQG RVLYETQVAA GPFAIQDLNS AVAGELDVRV QEQDGSVQEY KVNTANIPYL
TRPGSVRYKF YAGKPVGYDH KTDGDTFGTA EFSWGISNGW SLYGGMVSSS KYISLAAGIG
RDLMALGALA FDVTRSDAKL EDEHRSGQSY RVSYSKRFDD TGSQVTFAGY RFSEKDFMSF
SDYVSYRADN GDVMQSKEMY TVTFSQQFKA LGLSAYANYS HQTYWNSAAE DRYSVSLSRY
FDIGKWKNIS TSLTAYRNKF NGVNDDGMYL SFSIPWGDSG TLGMNSSFNG DASSHNLSYY
DRLDNGDNYR VAAGGTNDGG SLSGYYDHLG DAAEVTGNVD YQHGQYSSTG LSLRGGMTAT
TKGAALHRSN VPGGSRVLLD TGDAADVPVK GYSGNTATNR FGKAVVTEVS DYNKNSLSID
INKLPDNAEA TTSVVQATLT EGAIGYRRFN VLSGQKAMAI ISLKDSSHPP FGASVRNAEN
QEVGLVNDEG QAYLSGLKPG AKLNVNWNGT TQCAVTVPEK LTGLSQNGNL LLPCQ
|
|---|
| |