| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ent638_0141 |
|---|
| Symbol | |
|---|
| ID | 5113597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Enterobacter sp. 638 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009436 |
|---|
| Strand | + |
|---|
| Start bp | 159616 |
|---|
| End bp | 161481 |
|---|
| Gene Length | 1866 bp |
|---|
| Protein Length | 621 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640490298 |
|---|
| Product | selenocysteinyl-tRNA-specific translation factor |
|---|
| Protein accession | YP_001174882 |
|---|
| Protein GI | 146309808 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG3276] Selenocysteine-specific translation elongation factor |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00475] selenocysteine-specific elongation factor SelB
[TIGR00485] translation elongation factor TU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.645753 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.973594 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAATTG CCACTGCCGG TCATGTCGAC CACGGGAAAA CCACGCTGTT GCAGGCCATA
ACGGGTGTGA ATGCCGATCG CTTGCCCGAA GAGAAAAAAC GCGGCATGAC CATCGATCTG
GGATATGCCT ATTGGCCGCA ACCCGATGGC CGGATTCTGG GCTTTATCGA TGTGCCTGGG
CATGAAAAGT TTCTCTCGAA TATGCTGGCA GGCGTTGGCG GAATCGACCA CGCACTGCTG
GTGGTGGCCT GTGATGATGG CGTGATGGCG CAAACGCGCG AGCATCTGGC TATTTTGCAA
TTGACAGGTA ACCCGCAGCT CACGGTTGCG CTGACGAAAG CGGATCGTGT CGATGAGAGT
CGTATTGATG AAGTCCGTGA ACAGCTTCAG GCGACATTAC AGGAGTACGG TTTTGCCGAT
GCGCCTGTTT TTGTCACGGT CGCTACAGAA GGGCTGGGAA TCGACGAACT TCGTACGCAT
TTACAGCATC TTTCTTCGCG TGAGCAAACC CGCGATCATC GGTTCCGTTT AGCCATCGAC
CGCGCATTTA CCGTGAAAGG GGCTGGACTG GTCGTCACCG GTACGGCGCT GAGTGGTGAA
GTGAAAGTGG GGGACAGCCT GTGGCTGACG GGCGTCAACA AACCGATGCG TGTACGTGGT
CTCCATGCGC AGAATCAGCT GTCTGAACAG GCGCATGCCG GGCAGCGTAT CGCGCTGAAC
ATTGCGGGTG ATGCTGAAAA AGAACAGCTC AATCGCGGCG ACTGGCTGCT GTCCGACGCG
CCACCGGAGC CGTCCGAGCG CGTGATTGTT TCCCTGCAAG CCCATACGCC GCTGACGCAG
TGGCAGCCGC TGCATATCCA CCATGCCGCC AGCCACGTCA CTGGCCGCGT TTCGCTGCTG
GAAAACGATC TGGCAGAGCT GGTATTCGAT ACACCGCTTT GGCTGGCTGA TAATGACCGA
CTGGTGCTGC GCGATATCTC CGCGCGGACC ACGCTGGCAG GTGCTCGGGT AGTGACGTTA
AATCCACCCC GTCGCGGCAA GCGCAAAGCT GAATATCTCC AATGGCTGGC GGCGCTCGCG
CTGGCAGAGA ATGACAAATC CGCCCTGGCG GTGCATCTCG ATCGCGGTGC GGTAAATCTT
GCTGATTTTG CCTGGGCGCG GCAACTGAGT GACGAGGGGC TGCGCCGATT GTCGCAGCAG
CCCGATTTTA TCCAGGCAGG TGTTAACTTA CTGAACGCGC CGGTCGCCGC GCGCTGGCAG
CGTAAAGTGC TGGCGACGCT TGCGACTTAT CACGAACAGC ATCAGGACGA ACCGGGGCCT
GGGCGTGAAC GGCTGCGCCG TATGGCTCTG CCGATGGAAG ATGACGCGCT GGTTCTGCTG
TTGATTGAAA AAATGCGTGA AAGCGGCGTC ATTCATAGTC ACCACGGTTG GCTGCACCTG
CCGGATCACA AAGCGGGCTT CACGCCTGAA CAAGACGCGA TATGGCAAAA AGTCGCGTCG
TTATTTGGTG ATGAGCCCTG GTGGGTACGC GATTTGGCCC AGCAGACGGG GACAGACGAG
CAGCTCATGC GTCAGGTGTT GCGCCATTCA GCGCAGCAGG GGCTGATTAC GGCGATCGTG
AAAGATCGCT ACTACCGTAA CGATCGTATC GTGACGTTCG CCAATTTGAT TCGCGAGTTG
GATCAGGAAA AGGGATCGAC CTGCGCGGCT GACTTCCGCG ATCGGCTTAA CGTCGGGCGT
AAGCTGGCGA TTCAGATTCT GGAATATTTT AATCGGATTG GTTTTACGCG TCGTCGTGGT
AATGATCATC TATTACGCGA TTCGTTATTA TTTCCTGAGA TAACGTCAGT CGATAATACA
AATTAA
|
|---|
| Protein sequence | MIIATAGHVD HGKTTLLQAI TGVNADRLPE EKKRGMTIDL GYAYWPQPDG RILGFIDVPG
HEKFLSNMLA GVGGIDHALL VVACDDGVMA QTREHLAILQ LTGNPQLTVA LTKADRVDES
RIDEVREQLQ ATLQEYGFAD APVFVTVATE GLGIDELRTH LQHLSSREQT RDHRFRLAID
RAFTVKGAGL VVTGTALSGE VKVGDSLWLT GVNKPMRVRG LHAQNQLSEQ AHAGQRIALN
IAGDAEKEQL NRGDWLLSDA PPEPSERVIV SLQAHTPLTQ WQPLHIHHAA SHVTGRVSLL
ENDLAELVFD TPLWLADNDR LVLRDISART TLAGARVVTL NPPRRGKRKA EYLQWLAALA
LAENDKSALA VHLDRGAVNL ADFAWARQLS DEGLRRLSQQ PDFIQAGVNL LNAPVAARWQ
RKVLATLATY HEQHQDEPGP GRERLRRMAL PMEDDALVLL LIEKMRESGV IHSHHGWLHL
PDHKAGFTPE QDAIWQKVAS LFGDEPWWVR DLAQQTGTDE QLMRQVLRHS AQQGLITAIV
KDRYYRNDRI VTFANLIREL DQEKGSTCAA DFRDRLNVGR KLAIQILEYF NRIGFTRRRG
NDHLLRDSLL FPEITSVDNT N
|
|---|
| |