Gene Emin_1500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1500 
Symbol 
ID6263745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1593505 
End bp1594125 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content41% 
IMG OID642611988 
Product3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 
Protein accessionYP_001876385 
Protein GI187251903 
COG category[R] General function prediction only 
COG ID[COG1778] Low specificity phosphatase (HAD superfamily) 
TIGRFAM ID[TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0126906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAA GCGACATAAC AAAAAGAGCG GAAAAGGTAA AAATGCTTGT AACTGACGTT 
GACGGCGTTC TTACGGACGG CAGCCTGCAG TTTTTTAACT GGGAAGGGGA CAAAAAGAAC
CCGTTGGAAA TAAAAAAATT TTATTCATTG GACGGAGTAG GTCTGCTTGC GCTTAAAGGA
TGCGGTATTC AAACGGCCAT AATTACCGGC GGGGTTATAG ACGCGAGTCT TAATTTCGTG
CGAAACACTG GTTTTAACTA TATATACCAC AGCACTTTCG CAAAGCGGGC TCCTTTAGAG
CATTTGCAAA AACTTTCAGG CATATCTTAT GAAGAAATGG CCTTTGTGGG CGATGATGTT
ATTGACCTGC CTGTTTTAAA AAGAGTTGGG CTTTCATGTG TTGTTCCAAA TTCTGCCGAG
GATGTTTTTA GCATAGCCCA TTACCATACA AAAAATTACG GCGGACGCGG GGCCATACGT
GAGGTGTGCG AACTTATTTT GCGCGCCCAG GGTAAATGGG ATTTGTTTTT GGAAAATCTT
GAAAACGGCA TTTTTATGCC CAGTAAATTT AATGAGCAGC ATATATTTTC AAGAGAAGAT
TTAGAGAAGT TAAAAAACTA A
 
Protein sequence
MRKSDITKRA EKVKMLVTDV DGVLTDGSLQ FFNWEGDKKN PLEIKKFYSL DGVGLLALKG 
CGIQTAIITG GVIDASLNFV RNTGFNYIYH STFAKRAPLE HLQKLSGISY EEMAFVGDDV
IDLPVLKRVG LSCVVPNSAE DVFSIAHYHT KNYGGRGAIR EVCELILRAQ GKWDLFLENL
ENGIFMPSKF NEQHIFSRED LEKLKN