Gene Emin_1374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1374 
Symbol 
ID6264021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1475009 
End bp1476598 
Gene Length1590 bp 
Protein Length529 aa 
Translation table11 
GC content40% 
IMG OID642611855 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001876261 
Protein GI187251779 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.736006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG TTTTAATAAG CTTTGTACTT TTATGTATGT CCGCTTTTGC TTTTTCCAAT 
GAAGTCAATA TTTTTGACAG CGGAAAAAGC AAAGGTTCGG TTAGATCATA CATAAACTAC
TCCACTGTTT TTGTAGACGC CCAGGCTATG GCCAAAAAAC TAGGCGGCGA AAGCCAGTTT
TTTGCCCAAT CTAAACAAAT GCGTATTAAA ATAAAATCTT TTACCGCGGT TATCAACGCC
GGTAAAACGG AAATCATTGT TAACGGGCAG CAGGAAAAAC TGTCTTTGCC TGCTGAAATT
ACAAAGTCAA AAATTTATAT TCCGGTTGAT TTTTTTCTGC ATAAAGCATT ATCGGAAGCA
TTGGGAAGAC AGCTTCTTTT TTCAGACGGG AAGTTTTGCC TGGAAAGGTT TTATAATATT
GAATATTTAA ATTCGGAAAC ATTTAACACG CATTCAATAG TTGTTTTTGA CATGAAAAAA
GATTTGCCTT TTACAAAAAC GGTTAAAAAC AAACGTGTGG CGGAAGTAGA AATTCAGGGC
GGTATTTTTA AACGTATAGG AACAGTAAGG TTAAAAGATA AATTTATAAA TAATTTTACC
GTAAAAAAAT GCGGCGATAA TGAATGTATA CGTTTTTTAA CCTCCCCAAA GACTGACGGC
TGGAGTTTGG AAAAAGAAGG GCGTAACCTT GTTTTTAAAG CTTGGGAAAA GGGGTTTGGA
GCCGCTGCTG CGGACGCGTC TTTACCTGCC GTTAAACGAG AAGACAACAT TTCCCAATCT
GATGACGAAG ACGACGACGG GGAAATCTTG GCGGAGGACA GTTTTTTCTC ATCCTCAGCG
GTCGTAATAG CGAGGGCAAA ACCTTCTGCC GTGCAAACAA CTTCTAAAAA CACAAAACGT
AAAATGAAAA TCGTTATCGA TCCCGGCCAC GGCGGTAAGG ATCCCGGCGC TACAAGAAAA
TACAGCTCAA CGGAAAAAGA TATAAACCTT TGGATAGCGA AAGAGTTGTA CGCTCTTCTC
AAGAAAAAAG GTTTTGACGT AAAACTTACT CGTGATAACG ATACTTTTCT TGCGCTGAAC
CAACGTTCCA AAATATCTAA TGAGTTTGAT GCTGATTTGT TTGTTTCCAT ACACGCCAAC
GCTTCAAAGA AAACTGCCGC GCAGGGGTTT GAAGTTTATT TCCGCTCGGA AAAAGCCACA
GACTCCGAAG CCGCCGAAAC CGCTGCGTTT GAAAACGAAG CCTTACAGTA TGAAGATACA
AAAATTAACC TTGCTTTCGC TGATAAGCTG CTTCAATTTT TAGCGGTTAA TGAATATATT
AATGAAAGTT CCAAACTGGC GGGGCATGTG CGCAACAGTG TAAAAGCAAC CGCGGGCACA
GGGATAAGAG TTAACCCCAA CAGCAGCATA AAACAGGCTA ATTTTTATGT GTTAAAAGGC
GTTGATTCAC CCGCTATACT TGTAGAGTGC GGGTATATAA GCAACCCTTC AGACAGAAAA
CAGCTTAACA CCAAGGCCGT AAGGAATAAA CTGGCGGAAG GTATTTATAA AGGAATACTT
TCTTACGCTA AAGCCGAAGG ATGGCAATAA
 
Protein sequence
MKKVLISFVL LCMSAFAFSN EVNIFDSGKS KGSVRSYINY STVFVDAQAM AKKLGGESQF 
FAQSKQMRIK IKSFTAVINA GKTEIIVNGQ QEKLSLPAEI TKSKIYIPVD FFLHKALSEA
LGRQLLFSDG KFCLERFYNI EYLNSETFNT HSIVVFDMKK DLPFTKTVKN KRVAEVEIQG
GIFKRIGTVR LKDKFINNFT VKKCGDNECI RFLTSPKTDG WSLEKEGRNL VFKAWEKGFG
AAAADASLPA VKREDNISQS DDEDDDGEIL AEDSFFSSSA VVIARAKPSA VQTTSKNTKR
KMKIVIDPGH GGKDPGATRK YSSTEKDINL WIAKELYALL KKKGFDVKLT RDNDTFLALN
QRSKISNEFD ADLFVSIHAN ASKKTAAQGF EVYFRSEKAT DSEAAETAAF ENEALQYEDT
KINLAFADKL LQFLAVNEYI NESSKLAGHV RNSVKATAGT GIRVNPNSSI KQANFYVLKG
VDSPAILVEC GYISNPSDRK QLNTKAVRNK LAEGIYKGIL SYAKAEGWQ