Gene Emin_1343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_1343 
Symbol 
ID6263998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1444694 
End bp1445272 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content41% 
IMG OID642611823 
Productphosphoribosyltransferase 
Protein accessionYP_001876230 
Protein GI187251748 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR01367] orotate phosphoribosyltransferase, Thermus family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.000000345754 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAAGAA CAAAAAATTT AGATATTCTT TCGATATTAG AAGAGCACGG CGCGTTTGAG 
GTTGGTCATT TTGCCCTTCC TTCGGGTTGT CACAGCCAAA TTTATATTCA CGCCTGCTCA
ATAATGTCGC GCCCGCATAT AGCGCAAAAA GTGGCGCAGG CAATGTCGGA CAAATTTGCA
AAAGAAACGG ATATTGTTTT ATCTCCCAGT CCGGAAACTT CCGTAATAGC GCAGGAGGTT
GCCAGAGTGC GCGATAATGT GCGCGCCATG TTTGCTGAAA AATGCGAAAA GGGCCGCCTT
GTTTTAAAAA GAAATTTTAT TATAAAACCC GGAGAAAGGG TTCTTATCGT AGATGATGTG
GCCGTATCAG GCAAAAAAAT AGAAAGAGCC GTCGCTTTAG TTAAAAAGCA CGGCGGCAAA
GTTATAGGAG TTTCTGTTAT TGTAGACAGG TCTTCGGGGA TTTTAAGCGT TAAAGCACCC
TTAAGGGCGC TTGTTTCATA CCCTTTAAAA ACTTATATTA AAGACGACTG TCCGCTTTGC
AAAAATAAAA TACCCCTAAA AACTAAAGAG GAAAAATAA
 
Protein sequence
MGRTKNLDIL SILEEHGAFE VGHFALPSGC HSQIYIHACS IMSRPHIAQK VAQAMSDKFA 
KETDIVLSPS PETSVIAQEV ARVRDNVRAM FAEKCEKGRL VLKRNFIIKP GERVLIVDDV
AVSGKKIERA VALVKKHGGK VIGVSVIVDR SSGILSVKAP LRALVSYPLK TYIKDDCPLC
KNKIPLKTKE EK