Gene Emin_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0987 
Symbol 
ID6263548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp1073649 
End bp1074434 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content35% 
IMG OID642611467 
ProductXRE family transcriptional regulator 
Protein accessionYP_001875877 
Protein GI187251395 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000124238 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value8.983340000000001e-18 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGACTAGGA ACAAGCCTCA CTTCACTATC TATATTAAGT TTAGTAAAAA TAGTGAAGAA 
AGTCAAGGGG GTGTCTTATG CCCTCATTTT ACGACGAGGA GTGAGGATAT GAATAAAATA
GAAGCTCTAT TAAAAGAGTG GAACAATGGC GTTTTAAAAG GCTCTCAAAA AAAATTAGCC
ACCAAGTTAG ATGTTGGCGA AAGTGCCGTT TCTGGTTGGA TTTCGGGAAG AATAAAGCCG
GGATCTGACA ATATTATTGC CATATCTAAA ATATTTAAAA AGTCTGAAAA AGAAATAAAA
GAAATTTTTG GCATTCAGGA TAAAAGTAAA AAAGATTTGC CAACAATGGA GATGGTTCGT
ATCAACAACT ATGTACCGTT TATGGGGGAA ATTTACGCCG ATAGATTTAA CTGTGCGATA
CTCGAGGAGA CTCCTTCACT TTATATTCCT GTTCTTCGTG GAGATGATAA TGATTATGCC
GCAAAAGTTC GCGGCGACTG TATGGAGCCA TCACTAAAAG AAGGAACTAC CATTATTCTA
AGGAAATGCA CTATAACAGA TGTCTCCGAA GGAGAAATAG TAATTGCACG ACTAGAAGAT
GAATGTACAT TAAAACGCTT TTATTTAGAA AGTAATACTA TTTGGCTTAT TCCTGATAAT
GATGCATATG AACCTATTTT TGGGTCCATA CATGAGATAG AAATTCAAGC CAAAGTAATT
GACGAGTTTA GACCTCCTGC AAGAAAAAGG AGACCTAAAT TCTTAGAAGA AAAAAACAAA
AAATAG
 
Protein sequence
MTRNKPHFTI YIKFSKNSEE SQGGVLCPHF TTRSEDMNKI EALLKEWNNG VLKGSQKKLA 
TKLDVGESAV SGWISGRIKP GSDNIIAISK IFKKSEKEIK EIFGIQDKSK KDLPTMEMVR
INNYVPFMGE IYADRFNCAI LEETPSLYIP VLRGDDNDYA AKVRGDCMEP SLKEGTTIIL
RKCTITDVSE GEIVIARLED ECTLKRFYLE SNTIWLIPDN DAYEPIFGSI HEIEIQAKVI
DEFRPPARKR RPKFLEEKNK K