Gene Emin_0860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0860 
Symbol 
ID6262453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp949577 
End bp950893 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content42% 
IMG OID642611338 
Producthomoserine dehydrogenase 
Protein accessionYP_001875752 
Protein GI187251270 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0460] Homoserine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.017488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000000731878 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAATT ATAATATAGC TTTACTGGGC TGCGGAACGG TAGGTTCGGG CACGGCAAAA 
ATAATATCGG AGTTTAGCGC CGCTCTGTCC GAACGAAGCG GCAAAAAAAT AAATATTTCT
AAAATAGTTG ATTTGCGCCC TATGGCGGCC GCAAAAAAAG CGGGAGTTGA TATTTCTCTT
TTCGTTAACC CGAAAGAGGA GCTTAGTAAA GAGGAAGCCT CCGCCGCAAT AAAAGAAGTT
TTGGCTGATA AAAGCATTGA CCTTGTTGTC GAAACCATTG GCGGCGACGG CGACTACATT
AAAAATATAC ATGAAAGTGT TTTAAAAGCG GGTAAAAACC TTGTTACGGC AAATAAATCT
CTCCTTGCTA AAACGGGTAA AAGTCTGTTT GAAACAGCTA AAGAAAATAA TAAAAGCATA
GGGTTTGAGG CCGCCGTTTG CGGCGCTATC CCTATAATAA AGGGTTTGAC GGAATGTTTT
ACAGGGGATG ATATTTTAAG CGTTTACGGC ATAATGAATG GCACTAGCAA TTTTATTTTA
TCTAACATGT CATCAAGGGG AATATCTTTT GAAGAAGCCT TAAAAGAAGC CCAGCGGCTA
GGTTACGCGG AGGCCGACCC AAGCCTTGAT ATTAACGGCG GTGACGCTGC CAACAAACTT
AAAATTCTTA TTCAAATGAT TTACGGTGTT GACGCCCGCA GCATTACTAT CGGAGTAAAC
GGTATTGACG TTATTAAACC TGTTGACGTT GCTTTCGCAA AGCAGATAAA CAGCGTTATA
AAACTTATTT GTTACGCTAA AAGAGAGGGT AATAAGCTTT ACGCCGCAGT GCGTCCGATG
ATGTTGCATA AAGATATTTT CCTTGCCGAT ATTAACGGGG CCACAAACGC CGTGCGTTTA
ATTAATAAAT ATTCGGGCGA AAATATTTTA GTAGGCCAGG GCGCCGGCAT GGAAGAGACC
GGCAGCGCGA TAGTTTCCGA CATAGTTAAA ATAGCGCGCG GGGATAAACA ACGCAGTTCC
ATAGCCTGGC AGGAATGCGA AATAAAACCT TTTGAGGAAC ACGCCATGAA CTTTAATATT
ATTCTTAAAT CTAAAGATAT GCCGGGTGTT ACAGGCGCGG CGGCAAAAGC TATCGGTGAT
GAAAACGTTA ATATCTTTAC CATAGGCCCT AATTTTCACG AGGGGGAATT TGCTTATTTT
TCCATAGTGA CGGAAACGGC CACCTTAAAC CAAATTAACA GGGCCGTAGC TAAAATGCGC
GAGCTTAAAC CCGGCGCTTT TGAGAAAGAC GTTAAAGTTT TTCCTATAAT AAAATAA
 
Protein sequence
MENYNIALLG CGTVGSGTAK IISEFSAALS ERSGKKINIS KIVDLRPMAA AKKAGVDISL 
FVNPKEELSK EEASAAIKEV LADKSIDLVV ETIGGDGDYI KNIHESVLKA GKNLVTANKS
LLAKTGKSLF ETAKENNKSI GFEAAVCGAI PIIKGLTECF TGDDILSVYG IMNGTSNFIL
SNMSSRGISF EEALKEAQRL GYAEADPSLD INGGDAANKL KILIQMIYGV DARSITIGVN
GIDVIKPVDV AFAKQINSVI KLICYAKREG NKLYAAVRPM MLHKDIFLAD INGATNAVRL
INKYSGENIL VGQGAGMEET GSAIVSDIVK IARGDKQRSS IAWQECEIKP FEEHAMNFNI
ILKSKDMPGV TGAAAKAIGD ENVNIFTIGP NFHEGEFAYF SIVTETATLN QINRAVAKMR
ELKPGAFEKD VKVFPIIK