Gene Emin_0687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0687 
Symbol 
ID6263810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand- 
Start bp760876 
End bp761967 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content44% 
IMG OID642611159 
Product1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 
Protein accessionYP_001875579 
Protein GI187251097 
COG category[I] Lipid transport and metabolism 
COG ID[COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 
TIGRFAM ID[TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.00000000112855 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones1 
Fosmid unclonability p-value3.25567e-17 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACACAA AGAAAACAAG GCAAGTAAGA GTAGGCCAAT ATATTTTAGG CGGCGGTAAT 
CCTGTGCGCG TACAAAGCAT GTGTAATACC GACACTCGCG ACACCAACGC CACAATAGCA 
CAGATTTTGC GCCTTGAAGC AGCAGGCTGT GAAATTAACA GAGTGGCCGT GCCTGACATG 
GAAGCCGCGC AAAATTTAGG AAAAATAAAA AAGGGTATAA ATTCCCCCCT TGTGGCGGAT 
ATTCATTTTG ATTACAAACT GGCGCTTGAA GCTATTAAGC AAGGCGTTGA TAAAGTGCGT 
ATAAACCCCG GAAACATAGG TGCGGCCGAT AATGTAAGGC AGGTGGTTCA AGCCGCCAAA 
GATAAAGGCG TAGCCATAAG AATAGGCGTT AATGCGGGCT CTTTAAAATA TTTAAAAGAA 
ATTGAAGGCA AACCTAATTT GACATCCTTT GAATGGGCCG AAATAATGAC GCGCGAAGCG 
CTTGACCAGG CCGATATTTT AGAAAAACTT AATTTTAAAG ATATTTTAGT TTCTCTTAAA 
GCGGACGATT TGCCCCGTAC CATAGCCGCA AACGAACTTT TTGCAAAAAC ATCGGATATT 
CCTTTGCATA TAGGCCTTAC GGAAGCGGGC AGTTTTTTAT CGGGCACGGT CAAAAGCTCC 
ATAGCGTTAG GAACACTGCT TAAAAACGAC ATAGGCGCTA CTATCCGCGT CTCCTTAACG 
GAAGACCCTG TTTTGCAGGT AAGAACAGCC TATGAAATTT TAAAAGCCCT TGATATGCGC 
AAGTTCGGGC CCGATATAAT TTCATGCCCG ACCTGCGGAA GGTGCAGAGT TAATATAGCC 
CAAACGGTTA AAGAGTTAGA GAACAGGATT TATTCGGACA AAGAGTTGTT AGCAAAAGCC 
ACAGGCCTAA AAATAGCCGT AATGGGATGC ATAGTCAACG GCCCGGGTGA GGCAAGGGAC 
GCAAACTTCG GTATAGCCGG CGGCGTTAAC GAAGGCCTTT GGTTTATTGA CGGCAAAGCC 
GTTTCCAAGA TACCGCAGGC CGACTGGATT GAAACCATTT TAAACAAAAT AAGAGAAAGA 
AATGCATTTT AA
 
Protein sequence
MNTKKTRQVR VGQYILGGGN PVRVQSMCNT DTRDTNATIA QILRLEAAGC EINRVAVPDM 
EAAQNLGKIK KGINSPLVAD IHFDYKLALE AIKQGVDKVR INPGNIGAAD NVRQVVQAAK 
DKGVAIRIGV NAGSLKYLKE IEGKPNLTSF EWAEIMTREA LDQADILEKL NFKDILVSLK 
ADDLPRTIAA NELFAKTSDI PLHIGLTEAG SFLSGTVKSS IALGTLLKND IGATIRVSLT 
EDPVLQVRTA YEILKALDMR KFGPDIISCP TCGRCRVNIA QTVKELENRI YSDKELLAKA 
TGLKIAVMGC IVNGPGEARD ANFGIAGGVN EGLWFIDGKA VSKIPQADWI ETILNKIRER 
NAF