Gene Emin_0562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0562 
Symbol 
ID6262779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp613910 
End bp614875 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content39% 
IMG OID642611033 
Productprotein-export membrane protein SecF 
Protein accessionYP_001875454 
Protein GI187250972 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0341] Preprotein translocase subunit SecF 
TIGRFAM ID[TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAATT TAATTCCTAA AACAAACTTC GACTTCTTAA AAATAAGAAA ATACTTTTAC 
GCCGTCTCAG CTATTATTTT AATAGCCGGT TTAATTTGTA TTTTAACCCG CGGGCTTAAC
ATGGGTATTG ATTTTAAAGG CGGTACAATG GTTCAGGTTC AGTTTACAGA AAGCATCACC
ATTGATCAGG TAAGATCAGC CGTTGAAAAA TATAACCCCG AAATACAGTC CTACGTAGGC
AAAAACACCT ACATGATTAA GATAAAAGGC TCACAGGAAA ATGTTAATGA AGTAAGAAGC
GATGTTGAAA CCTCATTAAC AGCCGCCAAA CTTAAGTTTA CCGTAGTGGC TACGGACTTC
GTAGGTCCCA CGGTAGGTAA AGATCTTGGT GAAAGAGCAC TGTGGGCTTT AGCATTGTCT
TTAGTATTTA TGGTTCTTTA CATAGCGTTC CGCTTCCAAA ACATTATTTG GGGCACGGCG
GGCGTAATAG CCTTGATACA CGACGCGTTT TTCATGGTAG CGGCTTTCGC TTTCCTGCAA
AAAGAGTTTG ACCTTGTTAT CGTAGCCGCG CTTTTAACTG CGGTAGGTTA TTCTATTAAC
GATAATATCG TCATTTTCGA CCGCATGAGA GAAAACATTA AAGAAAACCC CAAAGAATCT
TTTTACAATA TCGTTAACCG CAGTCTTAAC GAAACATTGT CAAGAACGGT TATCACAGGC
TCAACAGTTT TAATAGTGCT TGTCATAATT TATTTCTTTG GCGGCGAAGT GTTAAAAAAC
TTCTCTTTAA TAATGCTTAT CGGCGTTATT GTGGGCACAT ATTCCACGCT TTTTATCGCC
ACGCCTATAG TTTATGATTG GGCAAAAGAT TCGGATAACT TCGCCAAAAC CGTGGGCAAC
CAGGATGTAG CCTTGGCGGC CGAGATAAAA ACCGCTAAAA AACATAATAA AAAGAAACAC
AGATAA
 
Protein sequence
MMNLIPKTNF DFLKIRKYFY AVSAIILIAG LICILTRGLN MGIDFKGGTM VQVQFTESIT 
IDQVRSAVEK YNPEIQSYVG KNTYMIKIKG SQENVNEVRS DVETSLTAAK LKFTVVATDF
VGPTVGKDLG ERALWALALS LVFMVLYIAF RFQNIIWGTA GVIALIHDAF FMVAAFAFLQ
KEFDLVIVAA LLTAVGYSIN DNIVIFDRMR ENIKENPKES FYNIVNRSLN ETLSRTVITG
STVLIVLVII YFFGGEVLKN FSLIMLIGVI VGTYSTLFIA TPIVYDWAKD SDNFAKTVGN
QDVALAAEIK TAKKHNKKKH R