| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Emin_0403 |
|---|
| Symbol | leuD |
|---|
| ID | 6262560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Elusimicrobium minutum Pei191 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010644 |
|---|
| Strand | + |
|---|
| Start bp | 430666 |
|---|
| End bp | 431160 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642610870 |
|---|
| Product | 3-isopropylmalate dehydratase small subunit |
|---|
| Protein accession | YP_001875297 |
|---|
| Protein GI | 187250815 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
|---|
| TIGRFAM ID | [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.583067 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGAA AAGCTTGGAA ATTTGGAGAT GATATCAGCA CCGACCATAT TGCGCCGGGA
CGTCTGTTTC ACCTGCGAAG TAATTTGCCC GAAATGGCAA AACATGTTTT AGAAGATGCG
GATTCCGCTT TCGCTTCCTC CATGTCAAAA GGGGATTTTG TTGTGGCGGG CAAAAACTTT
GGTTTAGGCT CTTCACGTGA GCACGCGCCT ACAATTATTA AACTTTCCGG TGTGAGCGCC
GTACTTGCCA AAAGTTTTGC CAGAATATTT TTTAGAAATG CTATTAATAT CGGTCTTTTG
TTAGTTGAAT GTGATACTGA CCAAATTAAA GCGGGCGACG AAATTGAACT TGACGTTAAA
CAAGGAGTAG TAAAAAATTT AACTTCAGGC AAGGACATAA AAATAACTCC TATGCCTGAC
GTTATGATAA AAATTTTACA AGACGGCGGC CTTATGGCGC ACATCCAAAA ACACGGCAAA
TTTGACTTGG TGTAA
|
|---|
| Protein sequence | MKGKAWKFGD DISTDHIAPG RLFHLRSNLP EMAKHVLEDA DSAFASSMSK GDFVVAGKNF
GLGSSREHAP TIIKLSGVSA VLAKSFARIF FRNAINIGLL LVECDTDQIK AGDEIELDVK
QGVVKNLTSG KDIKITPMPD VMIKILQDGG LMAHIQKHGK FDLV
|
|---|
| |