Gene Emin_0321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0321 
Symbol 
ID6263628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp342625 
End bp343899 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content40% 
IMG OID642610785 
ProductMscS mechanosensitive ion channel 
Protein accessionYP_001875217 
Protein GI187250735 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.870771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.0509238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCA TATTTAATCT TCTTGAATAT CTGCAAGTGT CTGAATTTTG GGCCTTGCTT 
TTGGCAAAAT TAATAAGTCT TGCCATATTT ATTTTTTTGA TATGGCTTGC GGGATATATT
TTCAGGCTTT TTACGGAAAA ATATCTTATA GACAGAATTT TCAAAGGCCG CTTTAAAAAA
TGGCACACCG CGCTGCAAAA AGGCAACTTT TTTGCCGCTA TAGGTTATTT TTTAGCCGGT
ATTTTAGCGC AGTACGCGGT TGACTTCTTT TTCCCCGGGG AATATGCCAG ATTCGCCTCC
TTCGGAGTAA AAGTTGTTAA CGTGTACTTT CAAATTTGCG TAATTATAAT AATTAATAAA
GTTATTGATA TTATAATTTC CTTCTACGGC AACAACCCCA AACTCCCTGT TAAAGGGTTA
ATGCAGGCTA TAAAAATAGT TATTAACTTT TTGGGCGGTC TTGTCATTTT GGCGTGGATG
CTTGGCAAAG AACCGCTTTT CTTTATTTCC GCTTTAGGTT TGGCCGCGTC CGTTTTAATG
TTGGTGTTTA AGGACCCTAT TTTAGGGTTA ACGGCAAGCT TCCAGCTTTC ATTTAACGAC
ATGCTCCGCA TAGGAGATTG GATTGAAATG CCCAAACACG GCGCCGACGG CGATGTTATA
GATATTTCTT TAACAAGCGT GCGCGTGCAA AATTGGGACA AAACTATTGT AAGCATTCCC
GCCTATGATT TAATTTCCTC CTCGTTTAAA AATTGGCGCG GAATGAGCGA CTCCGGCGGT
AGAAGAATAA AAAGAGCCAT AAATATCGAT GTGCAGACAA TTAAATTTAT GGATGAGGAC
CTTTTTAACA GACTTAAAAA AATTGAGTTA TTAAAAGAAT ATCTTACAAA GAAAGGGCAG
GAAATAGCCT CATTTAACGA AACTTGCAAT GTAAAAGAAA GCATGGTTAA CGGCAGGCAT
TTAACAAACG TGGGCACCTT TCGCGCTTAT TGCGAAGCTT ATATAGGCAG CCGTGATTAT
ATACATAAAA CATATACCTC CATGGTAAGG CAACTTGAGC CCGGCTCACA AGGGCTTCCT
TTGGAAATAT ATTGCTTTAC CAATACTACC GCGTGGGTAG CGTATGAGGC GCATATGTCT
GATTTATTTG ACCATTTGTT CGCGGTTATG AAAGACTTTG ATTTAATGCC TTTCCAAAAC
CCGAGCAGCG GAGATATAAG AAATCTGAGT TTAAAGGCAT TGCCCTCCGC GGTTGCCGGC
TCTGAAAATA AATAG
 
Protein sequence
MKPIFNLLEY LQVSEFWALL LAKLISLAIF IFLIWLAGYI FRLFTEKYLI DRIFKGRFKK 
WHTALQKGNF FAAIGYFLAG ILAQYAVDFF FPGEYARFAS FGVKVVNVYF QICVIIIINK
VIDIIISFYG NNPKLPVKGL MQAIKIVINF LGGLVILAWM LGKEPLFFIS ALGLAASVLM
LVFKDPILGL TASFQLSFND MLRIGDWIEM PKHGADGDVI DISLTSVRVQ NWDKTIVSIP
AYDLISSSFK NWRGMSDSGG RRIKRAINID VQTIKFMDED LFNRLKKIEL LKEYLTKKGQ
EIASFNETCN VKESMVNGRH LTNVGTFRAY CEAYIGSRDY IHKTYTSMVR QLEPGSQGLP
LEIYCFTNTT AWVAYEAHMS DLFDHLFAVM KDFDLMPFQN PSSGDIRNLS LKALPSAVAG
SENK