Gene Emin_0197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0197 
Symbol 
ID6262985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp206957 
End bp208270 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content44% 
IMG OID642610661 
Productexcinuclease ABC subunit C 
Protein accessionYP_001875098 
Protein GI187250616 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID[TIGR00194] excinuclease ABC, C subunit 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTTA ACTTTAATAT TTTACCAAAA TCTCCCGGTG TATACATAAT GCGTTCCGGC 
CTGGGCGAGG TTTTGTATAT CGGTAAAGCT AAAAATTTGG CGGCGCGCGT GCGGCAGTAT
TTTTTGGAGT CTAACCTCCA TAGCCGCGGC TGGCTTTTGC CGAGTTTGCT GCCGCTTGTG
GCCAAAATAG ATTATATTGT GGCGGCCAGC GAGCGGGACG CTTTGGTGCT TGAAAGCCGT
CTAATAAAGA AATACAAACC TTTTTTTAAT ACCGATGGTA AAGACGATAA ATCTTATCCT
TATATAAAAA TAAGCGATGA AGATTTCCCC AGGGGATTGC TGACTAGAAA CAAAAAAGGA
CCGGGCGAAT ATTACGGTCC GCACCCCAAC GCTTTCGCTA TTAAAAGTCT TTTGCGTTTT
TTGTGGACAA GCGGTTTTGC CCCGTTAAGG CCGTGTAAAT GGAATTTCAG CCTTTCTAAA
CCGTTAGACG AACGTAAAAT AAGAACTTGC GTTTATTTTC ACACAGGGCA ATGCCCCGCT
CCCTGCGCGG GAAAAATTTC TTATAAGGAT TACCAAAAAA TAGTGCAGCG GTTTAGGGAT
TTCGCAGAAG GCAATTTCGG TAAAATGAAA CACGGTTTGG CAAAAGCCAT GAAAATGGCC
AGTAAAAATA TGGATTATGA ATCAGCCGCC AGGTACAGAG ATTTTTTAAA CACCTTAGAA
CGCATGTCCG AACGCATTTT GGTAAGTGAA TATAAGGACG AAAAAATATT GTCAGCCATA
GACGCGTCTT CTAAAGTAAA AAGGCTGGGC GAAGTTTTGG GCTTTGCCAA AGTGCCCAGG
CATATAGAAA CTTTTGACAC TTCTGGTCTT TACGGGCGTT ACGCGGTAGG CAGTATGGTT
TGTTATATTG ACGGTAAAAA ACATCACGCG CATTACCGCA GGTTTAAAAT TAAGTCCGTT
TTGCCCGGCA CCGGCAATGA CGACTTTTTG ATGATGACGG AAATTGTGGG CAGACGCCTT
GCGGCCTTAA AAAAAGCTGG CGGCGCGCTA CCTGATTTAA TGGTTATTGA CGGCGGGAAA
GGCCAGCTTG GTATGGCTGA AGCCGCAGCC CAAAGAGCGG GTGTTAAAAT GAAATTTATT
TCCTTAGCTA AACGGGAAGA AGAAATTTTT GTTACCGGCC GCAGCGAAAG CATTAAACTG
CCTATAGGCG ATCCTGCCTT AAACCTGCTT ATGGAAATGC GAGACGAGGT GCACCGCTTC
GGCATAACTT ACCACAGGCA TTTGAGAGAC AAAAATTTAT TGGAAGATAA GTAG
 
Protein sequence
MSVNFNILPK SPGVYIMRSG LGEVLYIGKA KNLAARVRQY FLESNLHSRG WLLPSLLPLV 
AKIDYIVAAS ERDALVLESR LIKKYKPFFN TDGKDDKSYP YIKISDEDFP RGLLTRNKKG
PGEYYGPHPN AFAIKSLLRF LWTSGFAPLR PCKWNFSLSK PLDERKIRTC VYFHTGQCPA
PCAGKISYKD YQKIVQRFRD FAEGNFGKMK HGLAKAMKMA SKNMDYESAA RYRDFLNTLE
RMSERILVSE YKDEKILSAI DASSKVKRLG EVLGFAKVPR HIETFDTSGL YGRYAVGSMV
CYIDGKKHHA HYRRFKIKSV LPGTGNDDFL MMTEIVGRRL AALKKAGGAL PDLMVIDGGK
GQLGMAEAAA QRAGVKMKFI SLAKREEEIF VTGRSESIKL PIGDPALNLL MEMRDEVHRF
GITYHRHLRD KNLLEDK