Gene Emin_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0121 
Symbol 
ID6263530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp128032 
End bp128919 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content40% 
IMG OID642610584 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001875024 
Protein GI187250542 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000605752 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000000341036 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAAAT GGAAAATAAT AATATCCGTT ATAATTTTAG CGGTTGCGGG GTTTTTCTTT 
TTTGGAAAAG ATAAAAATAA AATATTTGAG CAAATCGAAA AGGACAGATT TTCGGTAAAA
CTGGAAACGG TAGAAAAGAG AAATTTAAAG AACGAACTTC TGCTTTCCGG CAGCATTAAA
GCGTTGGAAG AGGCTACGCT TTTTCCGCGC AGCGAAGGCA AACTTTTAAA AAATGTTTTA
AAAGAAGGCC AAAATGTTAA AAAAGGGCAA ACGGTATCTT TAATTGAGCG TGACGAGGTC
GGCGCGGTTT ATGAACCGGT TGTTGTCCCC TCAACCATTA CGGGCATAGT AGGTAAAATA
TATTTAGATC CGGGTGCTAA CGTTACGCGC AACACCGCCA TAGCTTTTGT TGTCAATCAA
AGCCAGGTAA GGCTTATTTT AGATGTGCCC GAAAGATACA TAGGAAATAT TTTTAAAGGC
CAGGCGGCCA GCTTTACGGT TGAAGGTTTT CCCGGTAAAA CATTTATGGG TAAAGTGAAT
GTTATAAGCC CGGTAGTGGA TACTGCAAGC AGAAGCGTAA CTATTGAGAT TCTTGCAGAT
AATGAACAGG GGCTTTTAAA ATCCGGCATG TTTGCAAAAG CGGACTTGGT GCTTGGCGAA
AAGAAAAACG CTGTTTCCGT TCTTTCCTCC AATATTTTTA CAGATGAGGA CGGCGTTTCA
AAATATGTTT TGGTTCCCGA AGGAGAACTT GCTAAAAGAC GCAATGTCAC GCTTGGTTTT
GTAAACGGCG GTTATTCCGA AATCCGCAGC GGGCTTCAGG AAGGCGAACA GATTATTAGG
TTTACGTTCG GTATTAAAGA CGGAAGCAAA ATTTCAATAG AAAAATAG
 
Protein sequence
MSKWKIIISV IILAVAGFFF FGKDKNKIFE QIEKDRFSVK LETVEKRNLK NELLLSGSIK 
ALEEATLFPR SEGKLLKNVL KEGQNVKKGQ TVSLIERDEV GAVYEPVVVP STITGIVGKI
YLDPGANVTR NTAIAFVVNQ SQVRLILDVP ERYIGNIFKG QAASFTVEGF PGKTFMGKVN
VISPVVDTAS RSVTIEILAD NEQGLLKSGM FAKADLVLGE KKNAVSVLSS NIFTDEDGVS
KYVLVPEGEL AKRRNVTLGF VNGGYSEIRS GLQEGEQIIR FTFGIKDGSK ISIEK