Gene Emin_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0108 
Symbol 
ID6263440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp111730 
End bp112200 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content38% 
IMG OID642610570 
Productlarge conductance mechanosensitive channel protein 
Protein accessionYP_001875011 
Protein GI187250529 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1970] Large-conductance mechanosensitive channel 
TIGRFAM ID[TIGR00220] large conductance mechanosensitive channel protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.0747555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAA AGAGTTTGGT AGGCGTTGTG CGTGAATTTA AAACATTTGC CATGCGGGGC 
AATGTTATGG ACATGGCCGT CGGTGTTATT TTGGGCGCGG CGTTTGGTAA AATAGTTGAT
TCTTTAGTTA AAGACGTTTT AATGCCTTTT TTGGGCTTAT TGCTCGGCAA AATAGATTTT
TCAAACTTAT ATTTGGTAAT TAAACAAGGT TCCGTGCACG GGCCTTATGC TACCTTGCAG
GCGGCGCAGA GCGCGGGCGC GTCCACAATT AATTACGGTA TGTTTTTAAA CAATATTATA
AGTTTTATTA TAGTGGCGTT TGCTATTTTT ATAATGATAA AGTTTATGAA TAATCTTAAA
CGTAAAGAAG AGCCTGCCCC TGTAACCACA AAAAGCTGCC CTTTTTGTTT TAGCGACATT
AATATACAAG CAATTAAATG CCCTGACTGT ACGGCTGATT TGAATAAATA A
 
Protein sequence
MLKKSLVGVV REFKTFAMRG NVMDMAVGVI LGAAFGKIVD SLVKDVLMPF LGLLLGKIDF 
SNLYLVIKQG SVHGPYATLQ AAQSAGASTI NYGMFLNNII SFIIVAFAIF IMIKFMNNLK
RKEEPAPVTT KSCPFCFSDI NIQAIKCPDC TADLNK