Gene Emin_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEmin_0103 
Symbol 
ID6263587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameElusimicrobium minutum Pei191 
KingdomBacteria 
Replicon accessionNC_010644 
Strand
Start bp108128 
End bp108937 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content40% 
IMG OID642610565 
ProductTatD family hydrolase 
Protein accessionYP_001875006 
Protein GI187250524 
COG category[L] Replication, recombination and repair 
COG ID[COG0084] Mg-dependent DNase 
TIGRFAM ID[TIGR00010] hydrolase, TatD family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0970628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.125784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATATGG ATATACATTT TATAGACTCG CACGCGCATA TGACAGACCC TGCCTTTGAT 
TCCGATAGGG ACGCTGTTAT AAAAAGCTGT TTTGAAGCGG GCGTTAAAAA TATTATTGAA
ATAGGGTGCG ACACGGCTGA GTGGGCGCCC TCGCTCGCGC TGGCGGATAA ATATAAGGGA
AATATTTACA CTGTTTTAGG TATTCACCCA AGCTGCGCTA ATAATTACAG CGAGGCTGCT
TTGGAGGAGT TAAAAAAACT TTTACTCCTT CCCTCTGTTG TCGGGTTTGG GGAAATCGGA
CTTGACTATA TTCATACCAG TACTTCTATA GAAGAACAAA AACAAATTTT TTCAGACCTT
CTTTGCATAA CCAAAGAAAT AAGCAAACCG ATTGTTTTGC ACGCCAGGAA AAATAATGAC
CCCGAAGATT ACGGCGTTTA TGGGGATATG TTTAAAATAT TAAAACAATC TTGGACGCCT
TCCAAAACGG CGGGCGTTTT ACATTGTTTC AGCGGGCGTT ATGAACACGC GGTAAGCGCG
CTTGATATGG GTTTAAAATT AGGTATTAAC GGTATTATTA CCTATAAAAA AAATAATGAT
TTAAGGGAAA CGCTTAAAAA GGTAGGTTTG GAAAATATTT TATTGGAAAC AGACTGCCCG
TATTTGCCGC CGCAAAGCAT AAGAGGTCAG CGCAACAGCC CAAGGTATAT ACCTGAAATA
GCAACTTATA TTGCCGATTA TCTCGGGATA CAAGTTGAAA AAGTAGCCGA AATAACCACA
CACAACACTA AAGAAATGTT TTCTTTATAA
 
Protein sequence
MYMDIHFIDS HAHMTDPAFD SDRDAVIKSC FEAGVKNIIE IGCDTAEWAP SLALADKYKG 
NIYTVLGIHP SCANNYSEAA LEELKKLLLL PSVVGFGEIG LDYIHTSTSI EEQKQIFSDL
LCITKEISKP IVLHARKNND PEDYGVYGDM FKILKQSWTP SKTAGVLHCF SGRYEHAVSA
LDMGLKLGIN GIITYKKNND LRETLKKVGL ENILLETDCP YLPPQSIRGQ RNSPRYIPEI
ATYIADYLGI QVEKVAEITT HNTKEMFSL