Gene Elen_3022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_3022 
Symbol 
ID8417356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp3508964 
End bp3510421 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content67% 
IMG OID645026001 
ProductATP-dependent transcriptional regulator, MalT- like, LuxR family 
Protein accessionYP_003183354 
Protein GI257792748 
COG category[K] Transcription 
COG ID[COG2909] ATP-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.709367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAA GCGACGTGGT GCGCGCGCTG GCGCCCGCAG ATCAGGCCGG CGAGGACGAG 
CCTCTGTCGG CGCTCATGTA CCCGCTGCGC TTCTTGGGGA TGGGCCTGCT CATCGCCTGG
CTGTGCTGCA CGCACGTCGC CTCCATCTTC CCGGGCGACG TGTTCGACCC CGCGCTGCGC
TCGGCATTCG ACACGGGCAT GCGCATCGGC GACATCGGCA CATTCCTCGC GTTCGTTCTA
TTCGCGCCGC GCATCGGGCG GCTGAGCAGG CACAAGGCGT TCTCGTGGGC AGCGGTCGCC
CTTACGACGG CTGGCACGGC GGCGGTGGGC CTCGCGCTCA TTCCCGGCGG GGTCGGCGAG
GCGGTCATCA TACCTGCCAG CATCGTCACC GCCATAGGCG GCGCTGTGCT GTTCTGCCTG
TGGGCCGAAG CGTACAGCCA GATGGGAGCC ACGCGCACGC TCATGTACGG CGCGCTGTCC
TGCATCGCGG CAGCCGCGGC GTCGTTCCTC ATCTCCACGA TGGAGGCGCC GTTCGGCGTT
ATCGCCACCG CACTGCTGCC CCTCGCATCG CTGGCATGCG CGCACCTGAG CTTTCGCCTG
TTGCCAACCG AGCGCGCCGT GGCGAAAGGG GTGCACTACC CCATTCCGTG GAAGCTCATC
GTGATCATGG CCATTGCAGG CTTGCTGTCC AGCTTCTCAG GCGCGTTCCT CTCGGCCACG
GAATACGTCG GCGCCATCCA TCGCGTCGCG GCCACCGGCA TCGTGGGCGT CGTGATTCTC
GTGATGGCCG TTTCGAAGCG CGACCGCTTC GACGCGCGTT TCCTGGCGAA GGTGGGACTG
CCGGTCGCCG TCGTCGCATT CGCCGTCATC CCCTTCGTCG CCCCCATGCA GGGCTACATC
GTGTCGGTGC TCATGCGGTT CGCTTACGTA TGGTTCACGT TCTTCGTGCT GCTCATGCTG
GCGAACATCT GCTACCGCTT CGAGATTCCC AGCCTGCGGC TGTTCGCCAT CGCGCGCGCG
TCAAGCGAGG CTGCGCTGCT GGCAGGCATC CTGGTGCGAC GCGCCCTGTG GCAGACCGAC
CTGCTGGCGG ATCCGACGAC GCTCGCGGGG TTCGCCTTGG CCGGCATCGT CTTGGTGCTG
GTGTGCGTGG TCATCTGGAT GAGCGAGAAG TCCGTGAACG GCGACTGGGG CGCGTCGGGC
CTGTCGCTGG CCGACCGGCT GCACGTGCCG GGACCGCGCG AGCGCTTCAT GAGCCGCTGC
GACGACCTGG CCGCGCAGTA CGACCTGACC GCCCGCGAAA CCGAGATCAT GGGGCTGATA
GCCCAGCGGA AGAGCCGCGC CGAGATCGAG CAGGAGCTGT TCCTGTCGCA GAACACGGTG
AAGACGCACG TGCGGCACCT GTACGCCAAG CTGGGCGTGC ACTCGAAAAC CGACGTCATC
GCGCTGTTCG AAGAGTGA
 
Protein sequence
MKSSDVVRAL APADQAGEDE PLSALMYPLR FLGMGLLIAW LCCTHVASIF PGDVFDPALR 
SAFDTGMRIG DIGTFLAFVL FAPRIGRLSR HKAFSWAAVA LTTAGTAAVG LALIPGGVGE
AVIIPASIVT AIGGAVLFCL WAEAYSQMGA TRTLMYGALS CIAAAAASFL ISTMEAPFGV
IATALLPLAS LACAHLSFRL LPTERAVAKG VHYPIPWKLI VIMAIAGLLS SFSGAFLSAT
EYVGAIHRVA ATGIVGVVIL VMAVSKRDRF DARFLAKVGL PVAVVAFAVI PFVAPMQGYI
VSVLMRFAYV WFTFFVLLML ANICYRFEIP SLRLFAIARA SSEAALLAGI LVRRALWQTD
LLADPTTLAG FALAGIVLVL VCVVIWMSEK SVNGDWGASG LSLADRLHVP GPRERFMSRC
DDLAAQYDLT ARETEIMGLI AQRKSRAEIE QELFLSQNTV KTHVRHLYAK LGVHSKTDVI
ALFEE