Gene Elen_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2022 
Symbol 
ID8416333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2369166 
End bp2370392 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content70% 
IMG OID645024999 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_003182375 
Protein GI257791769 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000000930345 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGACTGAGC AGAAACGCAT TTCGTTCTCC CCGCCGGACA TCACCCAGGC CGAGCTCGAC 
GAGGTCGCCG ACGCGCTGAG GAGCGGCTGG ATCACCACCG GCCCGAAGAC GAAGGAATTC
GAGCGTGAGA TCGCCCGCTT CGCGCAGGCC GACCGCGCCG CCACGTTCGC CTCGGCCACC
GCGGCGCTCG AATGCGCCCT GCGCGCCATC GGCGTGGGAC CCGGGGACGA AGTGATCACG
AGCGCGTACA CCTACACCGC CTCCTGCTCG GTCATCTGCC ACGTGGGCGC GACCCCCGTG
CTATGCGACG TGGCGCCCGG CTCCTACGAG ATGGACTACG ACGCCCTGCC CGGCCTCGTC
ACCGAGCGCA CGCGCGCCAT CATCCCCGTC GACATCGCCG GGCGCATGGC GGACTACGAG
CGCCTGTTCG CCGCGCTCGA CGCCGTGCGC GACCGTTGGA AGCCCGCGAC CGAGCTGCAG
CGCGCCTTCG ACCGCGTCAT CGTCCTGGCC GACGCCGCCC ACTCGTTCGG CGCGACGTAT
CGGGGACGTC CCTCCGGGTC GGTGGCCGAC TTCACCGCCT TCTCGTTCCA CGCCGTGAAG
AACCTGACCA CGGCCGAGGG CGGCGCGCTC GCGTGGCGCG CGGGCGCGTT CGACTCCGAC
GAGCTGTACC GCCAGTTCAT GCTGCAATCC CTGCACGGCC AGACGAAGGA CGCGCTGGCG
AAGAACCGCG CGGGCGCCTG GGAGTACGAC ATCGCCTTCC CCGGCTGGAA GTGCAACATG
ACCGACATCC AGGCGGCGCT CGGGCTTGCG CAGCTGCGCC GCTACCCCGC CTCGCTCGCC
CGCCGGCGCA CCATCGTCGA GCGCTACGAG CGCAACCTGC GCGACCGCGA CGTCGAGCTG
CTGCAGCACT ACGGCGAGGG CGGCGAATCG AGCGGGCACC TCATGTTCGT GCGTCTGAGG
GCCAAGTCGC AGGCGTTCCG CAACGCGCTG ATCGAGCGCA TGGCGGACGA CGGCGTGGCC
ACGAACGTGC ACTACAAGCC GCTGCCGCTG CTCACCGCGT ATCGCGATCT CGGCTTCGAC
ATCGCCGATT TCCCGAACGC GCTCGCGCAG TTCGAGAACG AGGTGACGCT GCCGCTGCAC
ACGCTGCTCT CCGACGACGA CGTGGACTAC GTGGCGGCGT CGTTCGGGCG CGCCTACGAC
AAGCTCGAGG CGGAGGGCGT CCGCTGA
 
Protein sequence
MTEQKRISFS PPDITQAELD EVADALRSGW ITTGPKTKEF EREIARFAQA DRAATFASAT 
AALECALRAI GVGPGDEVIT SAYTYTASCS VICHVGATPV LCDVAPGSYE MDYDALPGLV
TERTRAIIPV DIAGRMADYE RLFAALDAVR DRWKPATELQ RAFDRVIVLA DAAHSFGATY
RGRPSGSVAD FTAFSFHAVK NLTTAEGGAL AWRAGAFDSD ELYRQFMLQS LHGQTKDALA
KNRAGAWEYD IAFPGWKCNM TDIQAALGLA QLRRYPASLA RRRTIVERYE RNLRDRDVEL
LQHYGEGGES SGHLMFVRLR AKSQAFRNAL IERMADDGVA TNVHYKPLPL LTAYRDLGFD
IADFPNALAQ FENEVTLPLH TLLSDDDVDY VAASFGRAYD KLEAEGVR