Gene Elen_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1787 
Symbol 
ID8416091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2096129 
End bp2097073 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content68% 
IMG OID645024758 
Productprotein of unknown function DUF340 membrane 
Protein accessionYP_003182141 
Protein GI257791535 
COG category[S] Function unknown 
COG ID[COG2431] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.238052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.778551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGATAC TGGCGGTCAT GGCGGCGGGC GTGCTCGTAG GGGCGACGGT GTTTCCTGCA 
CGGCTCAAAG GGCTGAACGA GAAGCTGACG CTCGCGGCCA CTGGACTGCT CATTTTCTCG
ATGGGGGTGC TGCTCGCCGG ACGCGATTCG TTTCTGGAGG AGCTGGGCCA GGTGGGATGG
GCCAGCATCC TGTTCTGCCT CGTGCCGGTG GCGTTCTCGA CGATCGCCGT GTACGCGCTG
ACGAACCTGT TCATGTCCGA CATCGCCCGG CGTCCGGCGG GCCGGCATGT GTCTGCGGCG
CAGGACGATG CCGAGGGCGG CGCGGATGCG CGCGGCGAGA CCGTCATGAT CGGCGTGGCG
GTGGGAGCTC TCTCGCTGGG AGCGGCGTAC GGCCTCTCGG GCGTCTCGCT CGCGCCGGTC
GACCTTGTGG CCGATCATTC GGAAGCCGTC CTCTACGCGC TCATGTTCTT CGTGGGCATC
AGCGTGGGCG GCAGCCGCGG CCTCTTGGGC AAGCTGCGCC AGTACCATGT GCGCGTGCTC
ATCATCCCGG CCGGCATAGT GGCCGGATCC GTGCTCGGCG GGCTCGTCTG CGCGCCGCTC
GCGGGCATGT CGCTGCCCAC GGGCGCCGCC GTGGCGTCGG GCCTGGGATG GTACAGCCTG
GCGGGCGTCA TGATGACCGA CATCGCCGGA GCGCAGGTAG GCAGCATCAC GTTCCTGGCG
AACCTGCTGC GCGAGCTCGT GTCGTTCTTC AGCATCCCCT GGATCGCCAA GCATCTCAAC
TATCCCACGT GCATCGCGCC GGCCGGCGCC ACAAGCGAGG ACACCACGCT GCCCATGCTC
ATCCGCTGCA CGAACGGCGA GACCGTCGTG CTCTCGGTGC TGAACGGCGT CATCTGCTCC
GCGCTGGTCC CCGTGCTGAT CGAGGCGTTC CATCAATTCA TGTAG
 
Protein sequence
MEILAVMAAG VLVGATVFPA RLKGLNEKLT LAATGLLIFS MGVLLAGRDS FLEELGQVGW 
ASILFCLVPV AFSTIAVYAL TNLFMSDIAR RPAGRHVSAA QDDAEGGADA RGETVMIGVA
VGALSLGAAY GLSGVSLAPV DLVADHSEAV LYALMFFVGI SVGGSRGLLG KLRQYHVRVL
IIPAGIVAGS VLGGLVCAPL AGMSLPTGAA VASGLGWYSL AGVMMTDIAG AQVGSITFLA
NLLRELVSFF SIPWIAKHLN YPTCIAPAGA TSEDTTLPML IRCTNGETVV LSVLNGVICS
ALVPVLIEAF HQFM