| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1692 |
|---|
| Symbol | |
|---|
| ID | 8415991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 1994846 |
|---|
| End bp | 1996324 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 645024659 |
|---|
| Product | L-seryl-tRNA selenium transferase |
|---|
| Protein accession | YP_003182047 |
|---|
| Protein GI | 257791441 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
|---|
| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.624404 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.735525 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAATC CGTCACGCAC CGATCTGCTC CGCGCGCTCC CGCAGGTGGA GGAGATGCTC
CAGCTGCCCG AGGTGAGCGC GCTTCTGTCG CTCCTCCCCC GCAGCGTGCT GGCCGATTGC
GTGCGCGAGG CCGTCGACGA GACGCGTCGA GCCGTGCTTG CAGGAGCATG CGAACGGGTC
GACGTTCCGG CGCTCGCCGA ATCGACGCGC GCCCGGGCGT TCGCCCGGGC GCGCCCGTCG
CTGCGCCGCG TGATCAACGC CACGGGCATC GTCGTGCACA CGAACCTCGG GCGCAGCCCG
CTTGCCGACG AGGCCGTGAG CGCCGTGAGC GACGTGGCGC GCGGCTACTC CACGCTGGAG
TACGACACCG ATGCCATGGC GCGCGGCAGC CGCCACGACC ATGTGGAGCG CCTCATCTGC
ACGCTCACCG GCGCCGAGGC GGCGCTGGCC GTGAACAACA ACGCGGCGGC GGTCATGATG
GTGCTCCACG AGTTCGCGCG CGGGCACGAA GCCGTGGTGT CGCGCGGCGA GCTGGTGGAG
ATCGGCGGAT CGTTCCGCGT GCCCGACATC ATGGAGCTGT CGCAGGCGCG CATGGTGGAG
GTGGGCACCA CGAACAAGAC GCATGCCGTC GACTACGAGC GCGCCATCGG CGCCGACACC
TCGATGCTGT TGAAGGTGCA TCCTTCGAAC TACCGCGTGG TGGGCTTCGC CGAGAGCGTG
TCGGCGCGCG ACCTGCGCCC GCTGGCCGAT GCCGAGAACG CACGGCGCAC GGCATCCGGC
GAGCCGGGCG CGGGCGAGCT TCTGGTGTAC GAGGACCAGG GATCGGGCGC CTTCCTGAAC
CTCGATGCGT TCGGCGCGTA CGCCGAGCCC ACCGTGGCCG AGTCGCTGCA GGCGGGCTGC
GACCTCGTGT CGTTCTCGGG CGACAAGCTG CTGGGCGGCC CGCAGGCGGG CATCATCGTG
GGAGCGAAAC GGTTCATCGA CCGGCTGAAG AAGAACCCTT ACGCCCGCGC GATGCGCCTC
GACAAGATGA CGCTGGCCGC GCTGGAGGCC ACGCTGCGCC TCTACCTCGA CCCCGCGATC
GCGCTCGAGC GCATCCCTGC GCTGCGCATG CTGTCCGAGC CGGCCGAAGC CGTGCGCGGG
CGCGCCGAGC GGCTGGCGCG CACCTTGGAG GAAGCGCTTC CCGCAGGGGC GGCGCGCATC
GACGTGGTAC CGGATACCGC GCGGGCCGGC GGCGGCGCGC TGCCGTTGTG CGACATCGAC
TCGCATGCGG TGCGCATCGA GTTTTCGCGC GGGGACGCGC AGGGGTGCGA GACGTTCCTC
ATTGCGCGGC GCGACGTGCC CGTGATCGGG CGCATCAAGC ACGACGCCGT GCTGCTGGAC
GCGCGCACCG TGGCCGAGGA CGAGCTAGCC GAGGTCGCCG AGGCCGTGCG CGCCTACTTC
GACGCGCTCG ACGCCGGAGC CGAGGGGAGC CGCGCATGA
|
|---|
| Protein sequence | MANPSRTDLL RALPQVEEML QLPEVSALLS LLPRSVLADC VREAVDETRR AVLAGACERV
DVPALAESTR ARAFARARPS LRRVINATGI VVHTNLGRSP LADEAVSAVS DVARGYSTLE
YDTDAMARGS RHDHVERLIC TLTGAEAALA VNNNAAAVMM VLHEFARGHE AVVSRGELVE
IGGSFRVPDI MELSQARMVE VGTTNKTHAV DYERAIGADT SMLLKVHPSN YRVVGFAESV
SARDLRPLAD AENARRTASG EPGAGELLVY EDQGSGAFLN LDAFGAYAEP TVAESLQAGC
DLVSFSGDKL LGGPQAGIIV GAKRFIDRLK KNPYARAMRL DKMTLAALEA TLRLYLDPAI
ALERIPALRM LSEPAEAVRG RAERLARTLE EALPAGAARI DVVPDTARAG GGALPLCDID
SHAVRIEFSR GDAQGCETFL IARRDVPVIG RIKHDAVLLD ARTVAEDELA EVAEAVRAYF
DALDAGAEGS RA
|
|---|
| |