| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_1440 |
|---|
| Symbol | |
|---|
| ID | 8415738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 1717553 |
|---|
| End bp | 1719343 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645024409 |
|---|
| Product | ABC transporter, CydDC cysteine exporter (CydDC- E) family, permease/ATP-binding protein CydC |
|---|
| Protein accession | YP_003181798 |
|---|
| Protein GI | 257791192 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4987] ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR02868] thiol reductant ABC exporter, CydC subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.640443 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAGGG AAGGCGAAGC CGTGCAGGGC GCCGTGCCGC GCGAGGAGGG GTTCGCGAGC
GTGCTGCGCC GCGACGCCTG GGTGAAGCCG TTCTTCTTCC GTTACCGCAA GGCGTTGGCG
TTGGCGCTTT TCCTGGGGCT GCTGACGTTC GGGTTCGCCT CGGCGCTGAT GTTTACCTCA
GGCTACCTGG TCAGCGCTTC GGCGGTGGTT GAGACCATCC TCTTTCTGCA CCTGCCGCTC
ATCTTCGTGC GCATCTTCGG CGTGGGCAAG CCCATCCTGC AGTACCTCGA GCGCTTGACC
AGCCACGACT GGGTGCTGCG CATGACCAGC GGATTGCGGT TGAAGCTGTA CCGCGCGCTG
GAGCGCGACG CCGTGTTCTT CCGCGCCACG CACCGCACGG GCGACGTGCT GGGCCTTCTG
GCCGAGGATA TCGGGCACAT TCAGAACCTG TACCTGCGCA CCGTGTTCCC CACGGTGACG
GCATGGCTGC TGTTCGTCGT GCTGGTGGCA TGCCTGGGCT GGTTCTCGCT CTGGCTCGCG
CTGGCGATGC TGCTGGTGCT GGGCACGGCG GTGTTCCTCG TGCCGCTGGT GTCGGTGCTG
GCGAACGCCG CGCGCCAGGC GCGCCACAAG CAGATGAAGA ACGAGCTGTA CGCCGAGCTG
GCCGACAACG TGCTGGGTGT GTCCGACTGG GTGTTCGCCG GGCGCGGCGA GGAGTACCTC
ACGCGCCATA AGGAGCGCGA GCTGCGGATG CGCGACGTGC AGGAGCGCAT GGAGCGCTTC
GGTCGGCGCC GCGACGTGGT GCTGCAGGCG CTGTTCGGCA TCTGCGCCGT GCTGCTGCTG
GTGTGGGCGG GCGGGCGCTT CGGCGGGGAA GGGGGCGACG CGGCCAACTG GATCGCCGCG
TTCGTGCTGG GCTTCTTCCC GCTCATCGAC GCGTTCGCGC CCTTGTCGTC GGCGGCGGTG
GAGGCCGGCG CCTACCGCGA TTCCATCGCG CGTTTGAACG ACCTGCCGAC CCCCGGCGAG
GAGAAGCCGT CCGCGCGCGT GCCCGAGGCG CCGTTCGACG TGCGGGTTGA CCGGGCGGAG
TACCGCTATC CCGGCACGTC GCGTGACGTG CTGCGCGGCC TGAGCCTGAC GGTGCCGCAG
GGCCAGCGCG TGGCCGTGCT GGGCCGCAGC GGCGCGGGCA AGAGCACGCT GGCGTCCCTC
GTGCGCGGCG ACATACGACC CGATGCGGGC GGCGTGACGC TGGGCGGCTC GCCCACGGCC
GACCTCGGCG ACGAGGCGGC GAAGTGGATC GGGGTCATCC AGCAGCGCAC CTACCTGTTC
AACATGACGC TGCGCGACAA CCTGCGCATC GGGCGCGAGG ACGCGACCGA CGACGAGGTA
TGGGACGCGC TGGGCAGGGT GGGGCTGCGG TCGATGGCCG AGCGGCTGCC GAACGGCCTG
GACACGCTGG TGGACGAGGC CGGCCTGCGC TTCTCGGGCG GCGAGCGCCA CCGCGTCGCG
CTCGCGCGCG TGCTGCTGCA GGACGTGCCC GTGGTCATCC TGGACGAGCC CACGGTAGGC
CTCGATCCTA TCACCGAGCG CGCGCTGCTG GACGACCTGT TCGAGGCGCT GGCGGGCAAG
ACGGTGATCA TGATCACCCA CCATCTGGCC GGCGTGGACG CCATGGACCG CGTCGTGTTC
GTGGAGGACG GCCGCATCGC GCTCGACGGC GCGCCGGACG AGCTCGCGCG CACGAGCGAG
CGCTACCGAC GTCTGCTGGC CTTCGACCGC GGGCAGGCGG CGGGCCGCTA G
|
|---|
| Protein sequence | MSREGEAVQG AVPREEGFAS VLRRDAWVKP FFFRYRKALA LALFLGLLTF GFASALMFTS
GYLVSASAVV ETILFLHLPL IFVRIFGVGK PILQYLERLT SHDWVLRMTS GLRLKLYRAL
ERDAVFFRAT HRTGDVLGLL AEDIGHIQNL YLRTVFPTVT AWLLFVVLVA CLGWFSLWLA
LAMLLVLGTA VFLVPLVSVL ANAARQARHK QMKNELYAEL ADNVLGVSDW VFAGRGEEYL
TRHKERELRM RDVQERMERF GRRRDVVLQA LFGICAVLLL VWAGGRFGGE GGDAANWIAA
FVLGFFPLID AFAPLSSAAV EAGAYRDSIA RLNDLPTPGE EKPSARVPEA PFDVRVDRAE
YRYPGTSRDV LRGLSLTVPQ GQRVAVLGRS GAGKSTLASL VRGDIRPDAG GVTLGGSPTA
DLGDEAAKWI GVIQQRTYLF NMTLRDNLRI GREDATDDEV WDALGRVGLR SMAERLPNGL
DTLVDEAGLR FSGGERHRVA LARVLLQDVP VVILDEPTVG LDPITERALL DDLFEALAGK
TVIMITHHLA GVDAMDRVVF VEDGRIALDG APDELARTSE RYRRLLAFDR GQAAGR
|
|---|
| |