Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Elen_1405 |
Symbol | |
ID | 8415703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Eggerthella lenta DSM 2243 |
Kingdom | Bacteria |
Replicon accession | NC_013204 |
Strand | + |
Start bp | 1677553 |
End bp | 1678341 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 645024374 |
Product | Ribonuclease H |
Protein accession | YP_003181763 |
Protein GI | 257791157 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0164] Ribonuclease HII |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000142088 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGACCGA CCGTCGCCGA TATCAAGCAA CGCCTGCACG AAGCCGACGA GCGCGAGTTC GCGGTGCTCG AGCGCTCGCT CGTGGCCGAC GCGCGCAAGG GCGTGCGCGA CGCCGTGGAG CGGGCTCGGG CGCGTCTGGC GGCCGAGGCG GCGGAACGGC AGCGTCTGGC GTCGCTGTAC GCGTTCGAGC GCGCGCTGGC CGCAGAGCGC GGCGACGGCG TGATCGTAGG GCTCGACGAG GTGGGGCGCG GGCCGCTCGC CGGGCCTTTG GCCGTGGGCG CGGTGGTGCT GCCCTCCGAG CCGTTCATTG AGGGCCTCAA CGACTCCAAG CAGGTGAAGC CCGAGGCGCG CGAGCGCATC GCCGTGCAGG TGAAGGCCGT GGCCGTGGCT TGGACGGTCG AGTACGTGGA GGCGTCCGAC ATCGACGCTT GCGGTATGAC GGCCTCGCTC GCGCTGGCGT TCCGACGCGC GATCAGACGC ATCGAGGAAG CGGGCGTGCG CCCCGACGTG GTGTTGCTCG ACGGCAACCC GATGCGCCTC GACGAGCGCG AGGTGAACGT GGTGAAGGGC GACGGGAAGT GCGCCTCGAT CGCCGCCGCC TCCATCGTGG CGAAGGTAGA GCGCGATGCG CTCATGTGCC GCTACGCCGA GGAGTACCCC GAATACGGCT TCGACGCCTG CAAGGGCTAC GCGAGCGCGG CCCATATCGA GGCCATCAAG CGCTACGGTC TCACGCCCAT CCATCGCGCG ACGTTCTGCA CGGCCTTCAC GCAACCTGCC CTGTTCTAG
|
Protein sequence | MGPTVADIKQ RLHEADEREF AVLERSLVAD ARKGVRDAVE RARARLAAEA AERQRLASLY AFERALAAER GDGVIVGLDE VGRGPLAGPL AVGAVVLPSE PFIEGLNDSK QVKPEARERI AVQVKAVAVA WTVEYVEASD IDACGMTASL ALAFRRAIRR IEEAGVRPDV VLLDGNPMRL DEREVNVVKG DGKCASIAAA SIVAKVERDA LMCRYAEEYP EYGFDACKGY ASAAHIEAIK RYGLTPIHRA TFCTAFTQPA LF
|
| |