Gene Elen_1382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1382 
Symbol 
ID8415680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1648190 
End bp1648756 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content65% 
IMG OID645024351 
Productsignal peptidase I 
Protein accessionYP_003181740 
Protein GI257791134 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000813945 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.891342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATTCCG GAGAGCACGC TGCGTACCAG AAGCCCGGCA TCCTGCGCCG CTTCTTCGGC 
CTGCTCGCTT GGACGGGCTT CGTTGCGCTG CTGTCGTGGC TGACGTTCGT GTACGTGGGG
CACGCTTATG CTGTTCCCAC CGGCTCGATG GAAAAGACCA TCATGACCGG CGACCGCGTG
CTTGCTGAGA AGGTGAGCTA CTACCTGCGT GACCCGGAGC CCGGCGACAT CGTTATGTTC
GAAGACCCCG ATATCCCCGG CCGCCTGCTG CTCAAGCGCT GCATCGCCGT GGGCGGGCAG
ACCGTGGACA TCAACGACGA GGACGGCCTC GTGTACGTGG ACGGCGTCGC GCTGCGCGAG
CCCTACACCG ACGGCCTGCC CACGTACACG CTTGCCAGCG ACGTCTCCTA CCCCTACACG
GTGCCCGAAG GCATGATGTG GATGATGGGC GACAACCGAA CGAACTCGCA AGATTCGCGT
TACTTCGGCG CCGTGTCCGT CGCGTCGGCG GAGGCGCGCA GCGTGGCGGT GCTCTGGCCC
TTGGGCGACG TGGGCCTGCT GGGATAG
 
Protein sequence
MNSGEHAAYQ KPGILRRFFG LLAWTGFVAL LSWLTFVYVG HAYAVPTGSM EKTIMTGDRV 
LAEKVSYYLR DPEPGDIVMF EDPDIPGRLL LKRCIAVGGQ TVDINDEDGL VYVDGVALRE
PYTDGLPTYT LASDVSYPYT VPEGMMWMMG DNRTNSQDSR YFGAVSVASA EARSVAVLWP
LGDVGLLG