Gene Elen_1346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_1346 
Symbol 
ID8415644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp1613564 
End bp1614271 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content68% 
IMG OID645024315 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_003181704 
Protein GI257791098 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.895764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.645837 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAC CGGTGAAAAT AGCGCCATCC ATTCTGTCGG CCGATTTCAT GCATCTCGGT 
CGCGACATCG AGCTGATCGA GAAAGCGGGC GCAGGATACG TCCACGTCGA CGTCATGGAC
GGCCATTTCG TGCCGAACCT CACGATGGGC GTGCCCGTCG TCAAGCAGCT GAAGAAGGCC
ACGAGCCTGC CGCTCGACGT GCATCTCATG ATAGCGAACC CGCTGGAGCA GCTGCCTTGG
TTCCTCGATG CAGGAGCGGA CTCGGTGACC GTGCATGCCG AGGCGCTCGA CGCCGACGGG
CTGGCGCGCG CCGTCGCGGC CATTCATGCG GCGGGGGCGA AGGCGGCCGT CAGCGTCAAG
CCCCGCACGG CGGTCGGCGC GCTGGCGCCG GTGCTTGCCG ATCTGGACAT GGTGCTGGTC
ATGAGCGTAG AGCCGGGATT CTCCGGGCAG AGCTACATCG AGGGCAGCGA GGCTAAGGTG
ACGCGCATCA CCGAGATGGC GCGTGCGGTG GGCGCCTCTC CGCTCATCCA GGTGGACGGC
GGCATCGGGG AGGTCACGGC TCCTATCGTG GCCGCAGCCG GAGCCGACGT GCTCGTGTGC
GGAAACGCCG TTTTCGCGGC CGAGGATCCT GCCGCCGCGC TCGCGGCGGT GCAGGCGGCG
GCCGAGGAGG CGCGCCTGGC GGCGCTGGCC GTGTCGAAGG AGGCGTAA
 
Protein sequence
MFEPVKIAPS ILSADFMHLG RDIELIEKAG AGYVHVDVMD GHFVPNLTMG VPVVKQLKKA 
TSLPLDVHLM IANPLEQLPW FLDAGADSVT VHAEALDADG LARAVAAIHA AGAKAAVSVK
PRTAVGALAP VLADLDMVLV MSVEPGFSGQ SYIEGSEAKV TRITEMARAV GASPLIQVDG
GIGEVTAPIV AAAGADVLVC GNAVFAAEDP AAALAAVQAA AEEARLAALA VSKEA