| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0886 |
|---|
| Symbol | |
|---|
| ID | 8415176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 1083386 |
|---|
| End bp | 1083853 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 645023851 |
|---|
| Product | TadE family protein |
|---|
| Protein accession | YP_003181248 |
|---|
| Protein GI | 257790642 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4961] Flp pilus assembly protein TadG |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.980568 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGG CCAGGGCGCG CGGGCGGCGC GGTCAGGCGA CCGTCGAATT CGTCCTCATC
CTGCCGCTGC TGGTCCTCAT GCTCGTCGCC GTCGCCGACT ACGCGCACGT CGCGCGCGAG
ACCGCGAACG TGCAGGCCGC GAGCTCCGAG GGCGCGCGCT ACGCCGCGGC GAACCCCACC
CTGTCGAACG ACGCGATCGC CGCCTACGTG CGCGAGGCGT GCGCCCTGGG CGACGGCGCG
ACCGTCACCG TCACATCGGC GGAGGCGCCG TCGAAGCCGG TGACGCTCAA GAGCGGCGAC
AAGTCGGTCA CCGCGCGCTA TGCGCGAGAG AAGGTCACCG TCAAGGTCGT CGAGGATGTC
GGCTGCATCT TCCCGCTCAA GTCGCTCGGC GTGAAGGGCG CCACCGATGA CGGCTGGCAG
GTCCATTCCG AGACGTCGTC CATCAGGTCA GAGATAGAGA GGTCGTGA
|
|---|
| Protein sequence | MSAARARGRR GQATVEFVLI LPLLVLMLVA VADYAHVARE TANVQAASSE GARYAAANPT
LSNDAIAAYV REACALGDGA TVTVTSAEAP SKPVTLKSGD KSVTARYARE KVTVKVVEDV
GCIFPLKSLG VKGATDDGWQ VHSETSSIRS EIERS
|
|---|
| |