| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0675 |
|---|
| Symbol | |
|---|
| ID | 8414965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 854268 |
|---|
| End bp | 855227 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645023649 |
|---|
| Product | transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003181046 |
|---|
| Protein GI | 257790440 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.101969 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.010777 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAGATCG CCTTCTACTT CTACACGATC CTCGTCATGC TCGTCTGTAT CGCGGCGGGA
ACGATCTCCC TTTCCGCGTA CTTCGTCTGC CGTAAACGAA GCCATCTGTA CATGGTGGCG
TTCTTCCTGT TCTACTTCCT CGATCTGGCG CTCATTTTCC AGAACGAATA CCTCGGACAG
AACACCGAGT TCCCCCTCGA AGTGTTCTAC GCCATCGACC AGCCGGCCCT GAGGATATTC
TTCGCCCTCG GCATCTTGGA AGCCCTGTGG CTGATCGCCT TGGATTTCCT CGGCGAGAAA
CGGATGTCGA TGCGCATCGC TCCAGCCGTG GGCTTCGTCG TGCTCAGCAC CGTCGTGATC
GTCGCCCTGC CCGAAGGGCA GTACAAGCAA TGGCTGTTCT ACAGCATGCG CCAGGTGTTC
CTGCTGTGGT GCCTCGGCTA CGTGCTCATG CGCTACCGCA CCACCAAAAG CGAGATCGAG
AAGACGAGAC TGCGCCGTCA CGAGCCTTTG TTCCTGATCA CGTTGGTGCT GACCATGTGC
ATCATCCTGG AAGACACGTT CATGATGCTA GTGTGGGACC CCACGTCGGT CTCTATGCTG
CCCCTCTACA TATCCGAGCG CAACTTCTCC GAGAACTTCC TCATGCTGGC GTTCGCGTTC
TTCAGCCTGC GCGAAGCCGG AGCCACGTTG CGGCTGCGGT TCAAGGAGCC GCCCGCATCC
GAGAACCCCG AGGTGCGACG GCAGATCGAC GACCTGCTGC CCGCGTACTG CGAACGCCAC
GGCATGACCG CACGCGAGCG GGAGATCCTC GCCCTCGTGC TGCAGGGCAA GGACAATCAG
AACATCGCGA GCGAGCTGCA GCTGGCGCTG GGAACCGTGA AGGCGCACGT GCACAACATC
TTGAAGAAGA CCGACCACGC AAGCCGCCAG GATCTCACGC GCGACTTCTG GAAAGAGTGA
|
|---|
| Protein sequence | MEIAFYFYTI LVMLVCIAAG TISLSAYFVC RKRSHLYMVA FFLFYFLDLA LIFQNEYLGQ
NTEFPLEVFY AIDQPALRIF FALGILEALW LIALDFLGEK RMSMRIAPAV GFVVLSTVVI
VALPEGQYKQ WLFYSMRQVF LLWCLGYVLM RYRTTKSEIE KTRLRRHEPL FLITLVLTMC
IILEDTFMML VWDPTSVSML PLYISERNFS ENFLMLAFAF FSLREAGATL RLRFKEPPAS
ENPEVRRQID DLLPAYCERH GMTAREREIL ALVLQGKDNQ NIASELQLAL GTVKAHVHNI
LKKTDHASRQ DLTRDFWKE
|
|---|
| |