| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0412 |
|---|
| Symbol | |
|---|
| ID | 8414696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | + |
|---|
| Start bp | 528646 |
|---|
| End bp | 529887 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645023387 |
|---|
| Product | Agmatine deiminase |
|---|
| Protein accession | YP_003180790 |
|---|
| Protein GI | 257790184 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.512784 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.000333823 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGTTGGAAA ACTATCGGCA TCCAGGGGAA TTCGAACCCC AATCAGACGT TTTCATGGAA
TGGATTCCCG ACGCGTATCA GATGAAGGGC TACGACAACA GCCGGTCGTG CGCCGAGATC
GTCAAAGCGC TGCAGGAGTT CGGGGGCGTG ACGCTCCATA TCAACTGCGG TGCGGAAGGC
GTTCTCGAAC GTGCCAAGTC GAGCTTGGCG GAGAAGGGGG TCGATACGGC CGACATCCGC
TTCGTGCAAT TCGCCGATCC GAACTTCTAT GTGCGGGACA ACGGCCCGAC GGTTATGGTG
GACGATCGAG GCGGCAGAAT CCTGATCAAC CCGAATTGGA GCTACTACGG CACGCTGCCG
CCCGACGACC CGTACTGCGT GCAGTCGCGC ATCGCCGCCG TGCAGATGGG GGTGTCCTTG
GGCATCTTCG ACGTGGTGAA TTCCGATGTG GTGTCCGAAG GAGGGGATCG GGAGTTCAAC
GGTCAGGGCG TCATGATGTG CATCGAGGAC ACGGAAGTGC GCAAACGTAA TCCGGGTCTT
ACGAAAGAGC AGGTAGAAGC CGAATTCAAG AGACTCTACA ACGTGGAGAA GATCATCTGG
ATCCCACAGC CTTTGCTAGA AGACGACGAT TTCAGGATGG GGCCGTTGGA ATACCGCGAC
GGCGTGCCGT ACCTCGGCTC CAGCTTCGCG GCCCATATCG ACGAGCTGTG CCGCTTCGTG
GATGCGAACA CCGTCGTGCT TGCCGAGGTG ACCGACGATG AGGCGGCGGA AAGCGCGATC
GGCGCAGAGA ACAAACGACG CATCGAAGCC GCCTACGATG TGCTCTCGAA GGCGACGGAC
GTCCATGGCA ACCCGTTCGC CATCAAGCGC ATGCCCGTGC CTATCTCCAT CGATTACGTC
TTGACCGAGG ACGACGAGAA CTACGGGCTG TACGAGGGGC CCGTGATGGA GATGGGCGGC
GCCTTCGCCG ACGGCACGCC GTGGCCCGGC GGCCCCATCC ATCTCATAGC CTCGACGGGG
TACTGCAATT TCCTCATCTG CAACGGCGTG GTCATCGGCC AGCGCTACTG GCATGAGGGG
ATGGATCCGG CAATCAAGGG GAAGGACGAA GCCGCCCAAG CGGTTCTCGA GGAGTGCTTC
CCGGATCGCA CGGTGGTGAT GGTGGACAGC TTGGCGCTGA ACATGACCGG CGGCGGCGTG
CATTGCTGGA CGAAGAACGT TGCGGCGTCC GAGCCGCGAT GA
|
|---|
| Protein sequence | MLENYRHPGE FEPQSDVFME WIPDAYQMKG YDNSRSCAEI VKALQEFGGV TLHINCGAEG
VLERAKSSLA EKGVDTADIR FVQFADPNFY VRDNGPTVMV DDRGGRILIN PNWSYYGTLP
PDDPYCVQSR IAAVQMGVSL GIFDVVNSDV VSEGGDREFN GQGVMMCIED TEVRKRNPGL
TKEQVEAEFK RLYNVEKIIW IPQPLLEDDD FRMGPLEYRD GVPYLGSSFA AHIDELCRFV
DANTVVLAEV TDDEAAESAI GAENKRRIEA AYDVLSKATD VHGNPFAIKR MPVPISIDYV
LTEDDENYGL YEGPVMEMGG AFADGTPWPG GPIHLIASTG YCNFLICNGV VIGQRYWHEG
MDPAIKGKDE AAQAVLEECF PDRTVVMVDS LALNMTGGGV HCWTKNVAAS EPR
|
|---|
| |