Gene Elen_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0320 
Symbol 
ID8414604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp416678 
End bp417103 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content65% 
IMG OID645023297 
ProductpreQ(0) biosynthesis protein QueD 
Protein accessionYP_003180700 
Protein GI257790094 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGGAT TGAAAACCGA GGCCAGCTTC GACTCGGCCC ACTTCCTGAC CGATTACTAC 
GGCAAGTGCG AGAACCTGCA CGGCCACCGG TGGAGAGCGG TGGTGTACCT CGAGGTCGCC
GACCTGCAAG CCGACGGCAC GATGAAGGAC ATGGTGGTTG ATTTCGGCGT GTTCAAGCGC
GCGGTGCGCG ACCTGGCCGA AGAGCTGGAC CACACCTTCC TCGTGGAAGA GGGCTCGCTG
GCCGCGACGA CGCTGGCCGC CCTCGAGGCC GAGGGCTTCA GCCTGACCGT CCTGCCCTTC
CGCACCACCG CCGAAAACCT GGCGCGCTAC GTCTGCGACC GGCTGACGGA GCAGGGTTTC
CCCGTGTCCC AGGTGGACCT GTACGAAACC CCCAACAACT GCGCCATCTA CCGGAGGACG
GCATGA
 
Protein sequence
MYGLKTEASF DSAHFLTDYY GKCENLHGHR WRAVVYLEVA DLQADGTMKD MVVDFGVFKR 
AVRDLAEELD HTFLVEEGSL AATTLAALEA EGFSLTVLPF RTTAENLARY VCDRLTEQGF
PVSQVDLYET PNNCAIYRRT A