| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Elen_0133 |
|---|
| Symbol | |
|---|
| ID | 8414417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Eggerthella lenta DSM 2243 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013204 |
|---|
| Strand | - |
|---|
| Start bp | 183061 |
|---|
| End bp | 184503 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645023113 |
|---|
| Product | transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003180516 |
|---|
| Protein GI | 257789910 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.384824 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATTTCG GCTTGGCGCT CGCCCTGCTC GTCGGATTGT TCACGCTCTG GGGCGGACTC
TCCTTGGGCG GCCTCACGCG CCTGGGAATA CCCGAAATAC TGAAATACTG GTCGATTCCC
CTGCTCATAG CGCTTGGGTT GACGTTCTTC TCGGTTCTAG CGAAACGCAA GCCGCCGACA
AAGCGCTGTT CGAGCGCAGC TGCGGTGGCG GCAGGCGTCT TCGTTTTGGG CGGGTACGCC
GTTCTGTTCA TGGAGACGAC GGGGGTTCTG CGCCTTGCAA CGGTGAGCAC ATCGGCGATT
CTGGTAGGCG TGGGATACGG TCTTCTCTCG TTAGTTTGGC AGCATCGCCT ATCGTCGCTT
GCGTTCGACG ACGTAGTGAA AACGCTGCTG TTCGCCCTGG TCATCCAATC GGCAGGCTAC
CTGCTGCTAT TCGCGCTCTT GCAAGACCGC ACGTGGATGG TCTTCCCCTT CCTTGTCGCG
TTGGCGGTCG TTTTCTGCCT TATCACCCTC CGTCTTCCCA AGTCGAACGA AGATCGCCGC
ACGAACTCGA AAAGGCGAAA GGGAGCCTTG AAGAGCGCGG TTGCCGAGCT GAGCGATCCG
CTGCTGTGCG TATGCGCCAT CGCCTTCGCC GTTGCCCTGA CGCGAGCCAT CACGCTCGAC
GGGATAGAGC GAACCGACGC GATCAACCTC ATCGCCAGCG GCTGTATCAT AGTCGTCGCG
CTCGCCCTCT ACGGCATATG GTTCGTGTTG GGAGACGATC GCGCGCCGTT CAAAAAGCTG
AGCATTCTCG GACTCTACCG AGCGTTCTTC CCGATCATCG TCACGGCGCT CTTGGCGCTC
TCGATCGTGG GCAATTCGCT GGCGCTTTCG GTTGCGACCT TGGTGTACGT GCTGTTCACA
TTTGTTTCGG TGTTCATCAT GTCAACCAGC ATCTCCGTAG CTCGCGCACA TAGCGTGCCG
GCGACCTCCG TGTACGGAGC ATTCGCAGGA GCCACGTACT TCGTCTTTGC GGCGGCGACC
GCGTTGGGAG CATGGGTGTA CTACCCGCGA AACTTCGGCG CAGCCACGCT TTCGGTCATC
GTTCTGTTCG TGTTCTACAT CCTGGCGATG TCGTATGCGG CCATCCAGGC GCGCAAGAAG
CGCCGAGGGG AGGATGCCAC AACGCGAAAC CCGGTCGAAG CGAAAGCCAC GGTTGTCGAT
GGGGTTTCGG AGCGGTGCGC GGTCCTGTCG CAGCAACACG GCCTCACGGC GCGAGAAAAC
GACACGTTGC TGCTGCTGGC AAAGGGAAGG GACGTTCCCA GCATCGCGAA GCAGCTGTTC
ATATCGGAGA ACACGGTGCG ATCGCACAGC AAGAGCATCT ACAAGAAGCT GGACATCCAC
TCCAAGCAGG AGCTGCTGGA CCTCTTGGAG ACGATCGAGC TTGCATACGA GAACGACCGC
TGA
|
|---|
| Protein sequence | MYFGLALALL VGLFTLWGGL SLGGLTRLGI PEILKYWSIP LLIALGLTFF SVLAKRKPPT
KRCSSAAAVA AGVFVLGGYA VLFMETTGVL RLATVSTSAI LVGVGYGLLS LVWQHRLSSL
AFDDVVKTLL FALVIQSAGY LLLFALLQDR TWMVFPFLVA LAVVFCLITL RLPKSNEDRR
TNSKRRKGAL KSAVAELSDP LLCVCAIAFA VALTRAITLD GIERTDAINL IASGCIIVVA
LALYGIWFVL GDDRAPFKKL SILGLYRAFF PIIVTALLAL SIVGNSLALS VATLVYVLFT
FVSVFIMSTS ISVARAHSVP ATSVYGAFAG ATYFVFAAAT ALGAWVYYPR NFGAATLSVI
VLFVFYILAM SYAAIQARKK RRGEDATTRN PVEAKATVVD GVSERCAVLS QQHGLTAREN
DTLLLLAKGR DVPSIAKQLF ISENTVRSHS KSIYKKLDIH SKQELLDLLE TIELAYENDR
|
|---|
| |