Gene Elen_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_0081 
Symbol 
ID8414362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp107247 
End bp107882 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content55% 
IMG OID645023058 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003180464 
Protein GI257789858 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACC GACATGCGAA ATTCGAGAGC CTTCCCGAAG AGCGGCGCGA GGCCATCGTC 
AGCGCCGCCG TGGAAACGTT CGGCAAGAAC GATTACAAGA ACGCCTCGAC CGAGACGATC
GCGCGCAGGG CAGGCATCTC GAAGGGCCTT CTGTTCTTCT ACTTCAAGAA CAAGAAGGAG
CTGTACCTGT ACCTCATGGA GCATCTGATG GAAAAGGTGT CCAACCTGGT GCTGGACGAG
GGGTATTGGG AGATCGACGA CTTCTTCGAA CTGCTCGTCT ACGCGGCGGA AACCAAGTCC
AAGGTGCTGA GCAAGTTTCC CTACCTGCTG GAGTTCTCCA TCCGGGCCTT CTACCCGGAG
CACAAGGACA TAAAGGATAC GATGGACAGC TGGACGCAGC GACAACTCGA CTTTATGTTC
ACGACGTACT TCAAGAACGT GCGGTTTGAC CGGTTCCGCG ACGACATCGA TCCGAAGTAC
GTGCTCAACA TGCTGATTTG GCTGGCCGAC GGCTATCTGC ACCAACAGCA AGCGCTGCAT
CAACGCATCG ATTTGGACGC CATGATGGAC GAGATGTACC GCTGGTGCGA CATGCTGAAA
GCCTATTCGT ACAAAGAAGA GTACCGGGGA CGATGA
 
Protein sequence
MDDRHAKFES LPEERREAIV SAAVETFGKN DYKNASTETI ARRAGISKGL LFFYFKNKKE 
LYLYLMEHLM EKVSNLVLDE GYWEIDDFFE LLVYAAETKS KVLSKFPYLL EFSIRAFYPE
HKDIKDTMDS WTQRQLDFMF TTYFKNVRFD RFRDDIDPKY VLNMLIWLAD GYLHQQQALH
QRIDLDAMMD EMYRWCDMLK AYSYKEEYRG R