Gene EcolC_4218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_4218 
Symbol 
ID6067792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4659907 
End bp4660953 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content53% 
IMG OID641603650 
Productlipopolysaccharide biosynthesis protein WzzE 
Protein accessionYP_001727142 
Protein GI170022188 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3765] Chain length determinant protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00115149 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAAC CAATGCCTGG GAAACCGGCC GAAGACGCTG AAAATGAACT GGATATTCGT 
GGGTTGTTTC GTACCTTGTG GGCTGGGAAG CTATGGATTA TTGGCATGGG GCTGGCGTTT
GCGTTAATCG TGCTGGCGTA TACGTTTTTT GCTCGTCAGG AGTGGAGCTC GACGGCGATT
ACCGATCGTC CAACGGTGAA TATGCTGGGG GGATATTACT CGCAGCAGCA ATTTTTGCGT
AACCTGGATG TCCGTTCAAA CATGGCTTCT GCCGACCAAC CATCGGTCAT GGACGAAGCC
TATAAAGAGT TTGTTATGCA ACTGGCCTCG TGGGATACCC GCAGAGAGTT CTGGCTGCAA
ACCGACTATT ACAAACAGCG GATGGTGGGC AACAGCAAAG CCGATGCGGC GTTGCTGGAT
GAAATGATTA ACAACATCCA GTTTATCCCC GGAGACTTTA CCCGCGCGGT CAATGACAGC
GTGAAGCTTA TTGCCGAAAC CGCGCCTGAC GCTAATAACC TGTTACGTCA GTATGTTGCT
TTTGCCAGCC AGCGTGCAGC CAGCCATCTG AATGATGAGC TGAAAGGCGC ATGGGCGGCG
CGTACCATCC AGATGAAAGC TCAGGTGAAG CGTCAGGAAG AGGTGGCGAA AGCCATCTAC
GACCGCCGGA TGAACAGCAT TGAGCAGGCG CTGAAAATTG CTGAGCAGCA TAATATTTCG
CGCAGTGCGA CAGATGTACC TGCCGAGGAA TTACCTGATT CAGAAATGTT CCTGCTTGGG
CGTCCAATGC TTCAGGCTCG ACTGGAAAAT TTACAGGCCG TCGGTCCGGC CTTTGATCTC
GACTATGATC AGAATCGGGC CATGTTAAAC ACCCTGAATG TTGGTCCAAC CCTGGATCCG
CGTTTTCAGA CCTATCGCTA TTTGCGTACG CCGGAAGAAC CGGTAAAACG CGATAGCCCA
CGTCGTGCCT TCCTGATGAT TATGTGGGGC ATTGTCGGGG GGCTGATCGG GGCTGGTGTC
GCATTAACCC GCCGTTGCTC GAAATAG
 
Protein sequence
MTQPMPGKPA EDAENELDIR GLFRTLWAGK LWIIGMGLAF ALIVLAYTFF ARQEWSSTAI 
TDRPTVNMLG GYYSQQQFLR NLDVRSNMAS ADQPSVMDEA YKEFVMQLAS WDTRREFWLQ
TDYYKQRMVG NSKADAALLD EMINNIQFIP GDFTRAVNDS VKLIAETAPD ANNLLRQYVA
FASQRAASHL NDELKGAWAA RTIQMKAQVK RQEEVAKAIY DRRMNSIEQA LKIAEQHNIS
RSATDVPAEE LPDSEMFLLG RPMLQARLEN LQAVGPAFDL DYDQNRAMLN TLNVGPTLDP
RFQTYRYLRT PEEPVKRDSP RRAFLMIMWG IVGGLIGAGV ALTRRCSK