Gene EcolC_4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_4100 
Symbol 
ID6065760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4524615 
End bp4525370 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content48% 
IMG OID641603522 
ProductCDP-diacylglycerol pyrophosphatase 
Protein accessionYP_001727025 
Protein GI170022071 
COG category[I] Lipid transport and metabolism 
COG ID[COG2134] CDP-diacylglycerol pyrophosphatase 
TIGRFAM ID[TIGR00672] CDP-diacylglycerol pyrophosphatase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.985572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG CGGGTCTTCT TTTTTTGGTG ATGATAGTTA TCGCCGTTGT GGCTGCCGGT 
ATTGGTTACT GGAAATTAAC CGGTGAAGAG TCGGATACAT TACGTAAGAT TGTCCTTGAG
GAATGTTTGC CCAATCAGCA GCAAAATCAA AATCCTTCGC CATGTGCGGA AGTCAAACCC
AATGCCGGAT ACGTGGTTTT AAAAGATCTT AATGGTCCAC TGCAATATCT GTTGATGCCA
ACGTATCGTA TTAACGGTAC TGAAAGTCCT TTGTTGACCG ATCCTTCAAC GCCGAACTTC
TTTTGGTTGG CCTGGCAGGC GCGTGATTTT ATGAGCAAAA AATACGGCCA GCCGGTTCCC
GATCGCGCGG TTTCTTTGGC GATCAACTCC CGCACCGGGC GTACGCAAAA CCATTTTCAT
ATTCATATCT CTTGTATTCG TCCTGATGTG CGCGAACAAC TGGATAACAA TCTGGCGAAC
ATCAGCAGCC GCTGGTTGCC ACTGCCAGGT GGTTTGCGCG GGCATGAATA CCTGGCGCGT
CGGGTAACGG AAAGCGAACT GGTACAACGC AGCCCATTTA TAATGCTGGC AGAAGAAGTA
CCTGAGGCGC GGGAACATAT GGGAAGCTAC GGGCTGGCGA TGGTACGGCA GAGTGATAAC
TCATTTGTAT TGCTGGCGAC ACAACGAAAT CTACTGACGC TTAACCGTGC TTCAGCCGAG
GAAATTCAGG ATCATCAGTG TGAGATTTTG CGTTAA
 
Protein sequence
MKKAGLLFLV MIVIAVVAAG IGYWKLTGEE SDTLRKIVLE ECLPNQQQNQ NPSPCAEVKP 
NAGYVVLKDL NGPLQYLLMP TYRINGTESP LLTDPSTPNF FWLAWQARDF MSKKYGQPVP
DRAVSLAINS RTGRTQNHFH IHISCIRPDV REQLDNNLAN ISSRWLPLPG GLRGHEYLAR
RVTESELVQR SPFIMLAEEV PEAREHMGSY GLAMVRQSDN SFVLLATQRN LLTLNRASAE
EIQDHQCEIL R