Gene EcolC_4062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_4062 
Symbol 
ID6065316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4483511 
End bp4484362 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content53% 
IMG OID641603485 
ProductAraC family transcriptional regulator 
Protein accessionYP_001726988 
Protein GI170022034 
COG category[T] Signal transduction mechanisms 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCACG ACGTCAGCTA TCTGCTCTCC CGCCTGATCA ACGGCCCGCT GTCCCTGCGC 
CAGATTTACT TTGCCAGCAG TAACGGCCCG GTGCCCGATC TTGCGTATCA GGTCGATTTT
CCACGGCTGG AAATTGTGCT GGAAGGTGAG TTTGTTGATA CCGGCGCTGG AGCAACGTTA
GTTCCCGGCG ATGTGCTGTA CGTTGCCGCT GGTGGCTGGA ATTTCCCACA ATGGAAAACA
CCCGCTACCA CCTTTAGCGT GCTGTTTGGC AAACAGCAAC TCGGCTTCAG CGTCGTGCAA
TGGGATGGCA AACAATATCA AAATCTGGCG AAGCAACACG TCGCCCGACG CGGCCCACGT
ATAGGTTCTT TTCTGCTACA AACGCTCAAT GAAATGCAAA TGCAGCCGCA GGAGCAGCAA
ACGGCAAGGC TTATCGTAGC CAGCCTGCTT AGCCACTGCC GCGATTTGCT CGGCAGCCAA
ATCCAGACCG CCTCACGCAG CCAGGCACTA TTTGAAGCTA TTCGCGATTA TATCGACGAA
CGCTATGCCT CCGCGCTTAC CCGCGAATCT GTCGCACAGG CATTCTATAT TTCACCAAAC
TATCTCTCGC ACCTGTTTCA AAAAACGGGG GCCATTGGTT TTAACGAATA CCTGAATCAC
ACGCGACTGG AGCACGCTAA GACGTTATTG AAAGGCTATG ACCTGAAGGT AAAAGAAGTG
GCGCACGCCT GCGGCTTTGT CGACAGCAAC TACTTCTGCC GTCTGTTTCG TAAAAACACC
GAACGCTCGC CGTCGGAATA TCGCCGGCAG TACCACAGCC AACTGACAGA AAAACCGACT
ACTCCAGAAT AA
 
Protein sequence
MYHDVSYLLS RLINGPLSLR QIYFASSNGP VPDLAYQVDF PRLEIVLEGE FVDTGAGATL 
VPGDVLYVAA GGWNFPQWKT PATTFSVLFG KQQLGFSVVQ WDGKQYQNLA KQHVARRGPR
IGSFLLQTLN EMQMQPQEQQ TARLIVASLL SHCRDLLGSQ IQTASRSQAL FEAIRDYIDE
RYASALTRES VAQAFYISPN YLSHLFQKTG AIGFNEYLNH TRLEHAKTLL KGYDLKVKEV
AHACGFVDSN YFCRLFRKNT ERSPSEYRRQ YHSQLTEKPT TPE