| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_4050 |
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| Symbol | btuB |
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| ID | 6065161 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 4466591 |
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| End bp | 4468435 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641603473 |
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| Product | vitamin B12/cobalamin outer membrane transporter |
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| Protein accession | YP_001726976 |
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| Protein GI | 170022022 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00780594 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000540594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATTAAAA AAGCTTCGCT GCTGACGGCG TGTTCTGTCA CAGCCTTTTC CGCTTGGGCA
CAGGATACCA GCCCGGATAC TCTCGTCGTT ACTGCTAACC GTTTTGAACA GCCGCGCAGC
ACTGTGCTTG CACCAACCAC CGTTGTGACG CGTCAGGATA TCGACCGCTG GCAGTCGACC
TCGGTCAATG ATGTGCTGCG CCGTCTTCCG GGCGTCGATA TCACCCAAAA CGGCGGTTCA
GGTCAGCTCT CATCTATTTT TATTCGCGGT ACAAATGCCA GTCATGTGTT GGTGTTAATT
GATGGCGTAC GCCTGAATCT GGCGGGGGTG AGTGGTTCTG CCGACCTTAG CCAGTTCCCT
ATTGCGCTTG TCCAGCGTGT TGAATATATC CGTGGGCCGC GCTCCGCTGT TTATGGTTCC
GATGCAATAG GCGGGGTGGT GAATATCATC ACGACGCGCG ATGAACCCGG AACGGAAATT
TCAGCAGGGT GGGGAAGCAA TAGTTATCAG AACTATGATG TCTCTACGCA GCAACAACTG
GGGGATAAGA CACGGGTAAC GCTGTTGGGC GATTATGCCC ATACTCATGG TTATGATGTT
GTTGCCTATG GTAATACCGG AACGCAAGCG CAGACAGATA ACGATGGTTT TTTAAGTAAA
ACGCTTTATG GCGCGCTGGA GCATAACTTT ACTGATGCCT GGAGCGGCTT TGTGCGCGGC
TATGGCTATG ATAACCGTAC CAATTATGAC GCGTATTATT CTCCCGGTTC ACCGTTGCTC
GATACCCGTA AACTCTATAG CCAAAGTTGG GACGCCGGGC TGCGCTATAA CGGCGAACTG
ATTAAATCAC AACTCATTAC CAGCTATAGC CATAGCAAAG ATTACAACTA CGATCCCCAT
TATGGTCGTT ATGATTCGTC GGCGACGCTC GATGAGATGA AGCAATACAC CGTCCAGTGG
GCAAACAATG TCATCGTTGG TCACGGTAGT ATTGGTGCGG GTGTCGACTG GCAGAAACAG
ACTACGACGC CGGGTACAGG TTATGTTGAG GATGGATATG ATCAACGTAA TACCGGCATC
TATCTGACCG GGCTGCAACA AGTCGGCGAT TTTACCTTTG AAGGCGCAGC ACGCAGTGAC
GATAACTCAC AGTTTGGTCG TCATGGAACC TGGCAAACCA GCGCCGGTTG GGAATTCATC
GAAGGTTATC GCTTCATTGC TTCCTACGGG ACATCTTATA AGGCACCAAA TCTGGGGCAA
CTGTATGGCT TCTACGGAAA TCCGAATCTG GACCCGGAGA AAAGCAAACA GTGGGAAGGC
GCGTTTGAAG GCTTAACCGC TGGGGTGAAC TGGCGTATTT CCGGATATCG TAACGATGTC
AGTGACTTGA TCGATTATGA TGATCACACC CTGAAATATT ACAACGAAGG GAAAGCGCGG
ATTAAGGGCG TCGAGGCGAC CGCCAATTTT GATACCGGAC CACTGACGCA TACTGTGAGT
TATGATTATG TCGATGCGCG CAATGCGATT ACCGACACGC CGTTGTTACG CCGTGCTAAA
CAGCAGGTGA AATACCAGCT CGACTGGCAG TTGTATGACT TCGACTGGGG TATTACTTAT
CAGTATTTAG GCACTCGCTA TGATAAGGAT TACTCATCTT ATCCTTATCA AACCGTTAAA
ATGGGCGGTG TGAGCTTGTG GGATCTTGCG GTTGCGTATC CGGTCACCTC TCACCTGACA
GTTCGTGGTA AAATAGCCAA CCTGTTCGAC AAAGATTATG AGACAGTCTA TGGCTACCAA
ACTGCAGGAC GGGAATACAC CTTGTCTGGC AGCTACACCT TCTGA
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| Protein sequence | MIKKASLLTA CSVTAFSAWA QDTSPDTLVV TANRFEQPRS TVLAPTTVVT RQDIDRWQST
SVNDVLRRLP GVDITQNGGS GQLSSIFIRG TNASHVLVLI DGVRLNLAGV SGSADLSQFP
IALVQRVEYI RGPRSAVYGS DAIGGVVNII TTRDEPGTEI SAGWGSNSYQ NYDVSTQQQL
GDKTRVTLLG DYAHTHGYDV VAYGNTGTQA QTDNDGFLSK TLYGALEHNF TDAWSGFVRG
YGYDNRTNYD AYYSPGSPLL DTRKLYSQSW DAGLRYNGEL IKSQLITSYS HSKDYNYDPH
YGRYDSSATL DEMKQYTVQW ANNVIVGHGS IGAGVDWQKQ TTTPGTGYVE DGYDQRNTGI
YLTGLQQVGD FTFEGAARSD DNSQFGRHGT WQTSAGWEFI EGYRFIASYG TSYKAPNLGQ
LYGFYGNPNL DPEKSKQWEG AFEGLTAGVN WRISGYRNDV SDLIDYDDHT LKYYNEGKAR
IKGVEATANF DTGPLTHTVS YDYVDARNAI TDTPLLRRAK QQVKYQLDWQ LYDFDWGITY
QYLGTRYDKD YSSYPYQTVK MGGVSLWDLA VAYPVTSHLT VRGKIANLFD KDYETVYGYQ
TAGREYTLSG SYTF
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