| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_4040 |
|---|
| Symbol | rplJ |
|---|
| ID | 6064740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 4451836 |
|---|
| End bp | 4452333 |
|---|
| Gene Length | 498 bp |
|---|
| Protein Length | 165 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641603455 |
|---|
| Product | 50S ribosomal protein L10 |
|---|
| Protein accession | YP_001726966 |
|---|
| Protein GI | 170022012 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0244] Ribosomal protein L10 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00830699 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000887574 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTAA ATCTTCAAGA CAAACAAGCG ATTGTTGCTG AAGTCAGCGA AGTAGCCAAA
GGCGCGCTGT CTGCAGTAGT TGCGGATTCC CGTGGCGTAA CTGTAGATAA AATGACTGAA
CTGCGTAAAG CAGGTCGCGA AGCTGGCGTA TACATGCGTG TTGTTCGTAA CACCCTGCTG
CGCCGTGCTG TTGAAGGTAC TCCGTTCGAG TGCCTGAAAG ACGCGTTTGT TGGTCCGACC
CTGATTGCAT ACTCTATGGA ACACCCGGGC GCTGCTGCTC GTCTGTTCAA AGAGTTCGCG
AAAGCGAATG CAAAATTTGA GGTCAAAGCC GCTGCCTTTG AAGGTGAGCT GATCCCGGCG
TCTCAGATCG ACCGCCTGGC AACTCTGCCG ACCTACGAAG AAGCAATTGC ACGCCTGATG
GCAACCATGA AAGAAGCTTC GGCTGGCAAA CTGGTTCGTA CTCTGGCTGC TGTACGCGAT
GCGAAAGAAG CTGCTTAA
|
|---|
| Protein sequence | MALNLQDKQA IVAEVSEVAK GALSAVVADS RGVTVDKMTE LRKAGREAGV YMRVVRNTLL
RRAVEGTPFE CLKDAFVGPT LIAYSMEHPG AAARLFKEFA KANAKFEVKA AAFEGELIPA
SQIDRLATLP TYEEAIARLM ATMKEASAGK LVRTLAAVRD AKEAA
|
|---|
| |