Gene EcolC_3924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3924 
Symbol 
ID6064408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4311539 
End bp4312264 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content62% 
IMG OID641603337 
Productphosphonate metabolism transcriptional regulator PhnF 
Protein accessionYP_001726852 
Protein GI170021898 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID[TIGR02325] phosphonates metabolism transcriptional regulator PhnF 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACTTGT CTACACATCC GACCAGCTAC CCAACACGCT ATCAAGAGAT AGCCGCAAAA 
CTTGAGCAGG AGCTTCGTCA ACACTACCGC TGCGGCGACT ATCTTCCCGC CGAGCAGCAA
CTGGCAGCGC GCTTTGAGGT GAATCGCCAC ACCCTGCGCC GCGCCATCGA CCAACTGGTG
GAAAAAGGCT GGGTACAGCG CCGTCAGGGC GTCGGCGTGC TGGTGCTGAT GCGCCCGTTC
GATTACCCGC TCAACGCCCA GGCGCGTTTT AGCCAGAATC TGCTGGATCA GGGCAGCCAT
CCCACCAGCG AAAAACTGCT TTCGGTATTG CGCCCCGCGT CCGGCCACGT CGCTGACGCA
CTGGGGATTA CCGAGGGGGA GAACGTCATC CACCTGCGCA CCCTGCGTCG GGTCAACGGC
GTCGCGCTCT GTTTAATCGA CCACTACTTC GCGGACCTCA CCCTCTGGCC GACGCTGCAA
CGCTTCGACA GCGGCTCGCT GCACGATTTT CTGCGCGAGC AAACCGGAAT TGCGCTGCGC
CGCAGCCAGA CGCGGATCAG CGCCCGCCGC GCCCAGGCCA AAGAGTGCCA GCGTCTTGAA
ATCCCGAATA TGTCGCCGCT GCTGTGCGTG CGCACCCTTA ACCACCGTGA CGGTGAAAGC
AGCCCGGCGG AGTACTCCGT CAGCCTGACG CGCGCCGACA TGATTGAATT CACTATGGAG
CACTGA
 
Protein sequence
MHLSTHPTSY PTRYQEIAAK LEQELRQHYR CGDYLPAEQQ LAARFEVNRH TLRRAIDQLV 
EKGWVQRRQG VGVLVLMRPF DYPLNAQARF SQNLLDQGSH PTSEKLLSVL RPASGHVADA
LGITEGENVI HLRTLRRVNG VALCLIDHYF ADLTLWPTLQ RFDSGSLHDF LREQTGIALR
RSQTRISARR AQAKECQRLE IPNMSPLLCV RTLNHRDGES SPAEYSVSLT RADMIEFTME
H