| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3883 |
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| Symbol | |
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| ID | 6064346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 4241668 |
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| End bp | 4248009 |
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| Gene Length | 6342 bp |
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| Protein Length | 2113 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641603297 |
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| Product | helicase superfamily protein |
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| Protein accession | YP_001726812 |
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| Protein GI | 170021858 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0319703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCGT CCGTTGTCAG TCGGCAGGTC GCCGACAGCG TTGCCGCCTT TTTACGGGCG
GCGTTCCCGC TAAACAGCCC GCTGTTTAAC GGTGAGAATA ACGATAATGT CTCAATGCTG
GAGCAGTTTC TGGCCCAGCC CGAAACGCTG CTGAAAGGAC CATACCTTTC CGCCCAGTTG
CCGTTTCGTA AAAGTGACTT ACCGCTGAAT TTCTTCCCTA ATCTGACGCT GCCGTTCCCG
CCGCACGCGC ATCAGGCCCG GGCATTTCAG CGTCTGGGAA GCGACGCGCC ACAGCCGACG
CTGGTCGCTA CCGGTACCGG CTCCGGTAAA ACAGAATGCT TTATGTTCCC GCTGCTCAAC
CACTGCGCGG GCGCGTCACA AGCCGGGGTT AAAGCGATTA TCATCTACCC GATGAACGCC
CTGGCAACCG ATCAGGCCAG CCGTTTCGCC AAAACCATCG CCAGCGATCC ACAACTGCAT
GGCAAGGTGA CCGTCGGCCT GTTTGTCGGC GACAGCGAAA TCGAACCCAG CAAAAAAATG
TCGGCAGAAA AGGTCATTAC CTGCAAGCAC ACGCTGCGCG AAAGCCCGCC GGACATCCTG
TTGACCAACT ACAAAATGCT CGACTACCTG CTGATGCGCC CTGGCGATCA GCCGCTCTGG
CGTTACAACC AGCCCGGTTC ATTGCGTTAC CTGGTCGTGG ATGAATTGCA TACGTTTGAT
GGCGCGCAAG GGTCGGATCT GGCCTGTCTG GTGCGACGTC TGAAGCATCA CATAGGTGTA
GATAACCAAC GATTCGCCTG CGTCGGGACA TCAGCTACCG TCGGCGACGA GCTGGGGCAA
CTGCTCGATT ACGCAAAAAC AATCTTTGAC CAGCCGTTTA CCGATGACGC CGTTATTCGC
GAAGATCGCT ACACGGCAGC GGAGTACTTG CAGGATTACG CCATTGCGTA CAGTCAGTAT
CCGGGGCCGG AGGTCGCTTC GGCCCTGGAC CCGCAGAGTT ACGCTACCCC GGTAGCGTAT
CTTAACGGGC AAATCCCTTT GTGGTTCCCC GACAGCGACT TGCAACTCCC GGACGATCTG
GAGAGCGACG ACGGGCGTGA AAAGCGTATT GCGCTGGGGT CACTGTTACG CCGCCACAGC
GTGATGCATG TCTTACTCCA TGATCTGCAA GGCGGGATCC TCTCTGAACG AGAGTGTCTG
GAAAATCTCC AGGTCATGCT GGCAGAAAGC GCCGACCATG CCCGACGCGT GCTGCAAAGC
ATTCTGGCGC TGATCGCGCA GGCACGTCTC GAAGTACCGG AAACGGAACA CGATCGGCAA
AAACGTCTCC AGGCGAAGAA AGCGCGCCCG GTGTTGCCGT TTGTGCAACT GCGTTCCCAG
TTGTGGCTTC GTGAGATGCG TCGTCTGGTC GCCAGCGTGG CGAAAACGCC GAGACTGGTG
TTTGCCGATG ATGTGGCGGT GGAAGATCGC GAACACTATT TGCCGGTTAT CCACTGCCGT
GACTGCCATG CAACCGGCTG GGCCAGCCAG CGTCATGGGC AAAGCGTTCA GCTGGAAACA
GACCTCGACG GCATTTATCG CCAGTTCTTT GAAAAAGGGC GCTCCATCGT CCTTGCTTTC
CCGGATAACA ACGAAAAAGC GGTCAGTGGC GCACACCAGA AACTGTGCCC TACCTGTCTG
AAACTGAACC GACAGTCCAG CGTCCAGTGT GGACATTGCG GTCATACGGA ACTGTTGCAG
GTACTGATCC CGGATATGCT CAAAGAGCGT AAGGACGAGC TGGAGTTTGC TAATGAATGC
CCGTACTGCA ACAGCAAACA GGGGATTTCG ATCCTGGGGT CACGGGCTGC TAGTTTGTCG
GCGGTGATGA TTCACCAGCT TTATGGCAGC CAGTTCAACG AACATAAAAA GCTGATTACG
TTTTCTGACT CGGTACAAGA CGCCGCGCAT CGTGCCAGCT TCTTTACTGC CCGCACATGG
CCGCTGATGA TTCGTGGGCA AATCGCCAGT GTTCTTGGCG AAAAAGAGAC ATTACCGCTG
GATGCGTTCG CGGCGCGTGT TTGCCAACAA ACGCGTGAAC GTTCACCGGA CGATGCTCAT
TTTGCAGCGA ACTTCATCGC ACCAAATATG CAGTGGCTGA ATGATTATCA GACACTGAAA
AATGAAGGCA AACTGGCGGA GAACTCCGAT CTGCCGGAGC TGGTTTCCCT GCGCCTCGAC
TGGGAGGTGT ACAGCGAATT TACCCTGCGC GCGCGTATCG GACGTACGCT GGAAGCCACC
GGTTATGCCG TTGCCGGAGT GGATAAAGAT CGCTTCAATC CGGCAATTAC CGCCCTGCAT
CAACAGCTTT GTGAAGAGCT GGGTGATGAG ATGTCCGGTG TGAGCGTCGA GCAGGTAGCG
CACCTGGCGC TGGGGGTTAT CTGGTATCAA CGCCAGGCCG GGGCCGTTAT GCATCCGGCG
TTCGAAAGTT ATCGCCGTGA TGGCACGACC TTTATGATGA CGCAAAAAGA GCGTACCTCG
CGCTATATGC CTTCTATCGG TCCGAAAACG CGTAAACCGG CTTATGCCTC GTTTGAAAAA
ATTAATGGTT TCCATCGCCT GATTGGCGCG AAGTCTAACC CCAGTTGGTA TCAGCATTGG
ATCAATCGCA CGCTGAGTAA CGGCAATAAT CTGTTTATCA GTAGCGTTGC GGAAACAGTG
TTACGACGCC TGTTTACGGC GTTGAAAATA GCCGGAGTTG TAAAAGATTT TGACACCAAA
GGGCGTGAAG CCTGGGGACT GGTGCCTTCT GCGCTGGTGG TGAGCCGTGA CGTCGTTCAG
CTTAATTGTT CATGTTGCCG TGAGGTTGTC CGGGCTCCGG CCGATCAAGG CTGGCAGTGG
CGTAATGCGC CTTGTCTCTC TTTACGTTGT GAAGGTCGTT ACCAGGAAGT CGACAATATG
GCGACCTGGC GTTGGGAGAA CATGGACATC GCGCGCGTGC AGGGCGCAGA ACACACGGGG
CTGCTTAGCC GTGAAGATCG CGAAGCCACC GAAAAATCGT TCTACCGCGG CAACCAACCG
TGGAATATCA ACCTGTTGTC GGCAACACCG ACGCTGGAGA TGGGTATTGA CGTTGGGGAT
CTTTCCACCG TTTTACTCTG TTCTGTCCCA CCTGCTCAGG CCAACTACTT GCAGCGTATT
GGTCGCGCCG GTCGTAAAGA TGGTAACGCG TTAAACATTA CCGTGGCAGA AGGGAACCCG
CACGATCAGT TTTTCTTTGA AGAACCGCTG GAGATGATGC AGGGCCAGGT GCAGGCTCCT
GGCGTCTTCC TCAATGCAAC GGCTATTCTC GAACGTCAGC TGGCGGCTTT TTGTATGGAT
AACTGGGTGA AAACCGGTGT ACCAGAATCC GCTATCTGTA AAAACGTCAA ACAGATGCTG
GATGAGCTGG AGTTCGGGCG TAAATCGGGT TTTCCGTATA ACTTACTGAG ATATATCGAA
CAGCATCATG CGGAGATTGC TGCACAATTT ACGGCGATCT TCCCCGATCT TGCCGCAGAA
ACTCGTCAAC AGTTGTTGTC TTATCTTCAG GGCGCGCCAG GACAACGCTC TCTGGTGCAG
CGTATCGAAG AGGCGTTAAA ACTGCTGGTG GAAGATCGCA AATCTCTGCG TTCACGCATC
GATAAACTCA AGCGCAGTAT CGATAAGCTG GAGAACGCGC CGCGCGATCA AAACTTTGAC
AGCGATATGC GCGAGTTAAC TTCAGAACGG CAGGCGCTGA TGGCGCTGGT CAATCAAATC
AACAATAAGC AGACGCTGAA TTTCCTCACG GATGAAGGTC TGCTGCCTAA CTACGCCTTC
CCGGAAGCCG GTATTACGTT ACGTTCTGTG CTCTGGCGGC GTAAAGAAGG CGGGGAAGCG
CGTGAATATC AAAACACCAC TTTCGAATAT GAACGCCCGG CATCAACGGC GCTGGCTGAG
CTGGCTCCGC TGAATAATTT CTATGCCGGT GGGCATAAAG TTGAAATTGA GCAGATAGAC
TTGAAGGTCT CTGAGCCGGA GAACTGGCGT ATCTGTAGCC ACTGTAACTA CAGCGAAAAT
ATCGACCAGA CGGGCGACCA GCATAAATAT TGCCCGAAAT GTGGCACACC GGGGTGGGCC
GACGCCGGAC AAAAAACCAC GCTGCTGAAA CTTCGCCAGG TTTATGCCCG CGCCAGCGCA
CGTGATAGCC AGATCAGCGA CGAGAGCGAC AGTCGTGAAC CTGCTTTCTT CCAGCGTCAG
CTATTGGTTA GTTTCGAAAA AGAGGATGTA TCGGCGGCAT ACGCGATTGA GGAAGGCGAA
GTTCCGTTTG GTTTTGAATT TTTAAGCAAA GTCACCCTGC GGGATATCAA CTTCGGCAAA
ATGGCGGATG ATGCCAATGA GTTGATGATT GCCGGAGAAG CGAAGAAGCG AACCGGGTTT
AAAGTTTGCC TCGGGTGCGG CATGGTACAG CGTCCTCGCG ATCATGAACC ACGTCATGAT
TTGAGCTGCA AATATCGCAC GGAACCGGAA AAGGCGAAGT TCGAAGATTA TCTCTATCTC
TATCGCCAGC TGGAGTCAGA AGCGTTGCGA ATTCTGCTAC CGGTAAGCAG TTACAGTAAT
GACCGTGTCG TGGAGGCTTC TCTTGGGGCG GCGATCCAGC TCGGCCTTAA ACATTACTTC
AAGGGGAATG TCGATCACCT GAAAGGCGTT GTGTACCGCG AGCCGGAAAA TGAAGGCGAA
TCCTGGCGGC AGTATCTGGT GATTTACGAT ACCGTCCCGG GGGGAACTGG TTCTCTTAAA
GAGCTGATGC GCACTCCCGA CAATTTGCTG AAATTACTTG AACTGGCCTA TCAGGCGATA
GTGGAATGCA GTTGCAACCA TGATACGCAT AAAGATGGTT GTTATCGTTG CGTTTACGCT
TACCGTGACC GTGGGCGCAT GAAGTATGTC TCCCGCGATC AGGCGCGTCT CTTGCTGGCG
AAAATTTTGC AGGCAAGAGA GTCGATACGG GTAATTGATT CCATCAAAAA CATTTCCCTC
GAAGCCATGA TGGGCAGTGA GCTGGAAAAA CGGTTTATTA GCTGCCTGCA AGAAAATAAA
AACCTGATTG TCAGTCGCAG TTACGCGCAT CAGGGCGCTG GGTGGATTAT TAACACCCGC
AGCGAACCGA TGATGAGCTG GCATCTTAAA GCTCAGGTGG ATTTAGGCGC TAAAGAGGCG
GTGGGGATCC CTTGTCGCCC GGATTACGTG CTATATCCGC TTATGCAGTC TGATGCCATC
AAACCGGTAG CTATTTTCCT TGATGGCTTT GCGTTTCACA AAAATAGCGT CGCAGAGGAT
GTGCAAAAAC GCCAGGCGAT TCGGGATAGC GGTAATTTCT GGGTGTGGAC AGTCACGTGG
GCCGATCTCA AAGAGCCTGG GCTTAAACAT GTTCAGGATG TCCTGGGGCT TGGGCATAAC
CCGGATATGA AACAGCCTAA GTTTTATAAC CTGTTTCACG ATACCAACTT TGCGGCCCTT
GAAGCGTCGT TCCGGGAACG CAACAGTTTT GCACTGCTGC TGGATTATCT CGCCGATCCG
GGCGGAAGAA CGCAGTTATG GCAGAAAATG GCTGCTGCAC ATGCCTGGAT GTGGTTGGAT
GTGAAGAAGT CACAGGACGC GGGAACGAAA CAAAAGTATG CCTATGAAAT GCAGGAAAAC
GCGCCAGACT GGCGGCTAGC AGAGCTTTTG CCAGACGAAC CGTTTGTCTT TGGTGGTTTA
CTCGATAGCT GTAACTCATC GCAGCAATTT ATTGAGCTGG CTTCGGTGTT GCCACAACAA
GCCATTAAAC CGACGACCAG TGTCGCACAA ATGCGCAGCT GGCTGCGTTT GCATATCTGT
TTTGACGATC GCTATACGCA GGATGACGGT TATGAAGCGG GACTCAATGG CTTCTGGCGA
CTGGTAAACC TGTTACAGTT CCTGCCGGAT ATAACCTTTA CCAGCCGTAA AGCCGTGCAT
TTACCGCAGG AAAGCGTTGA CACTAAAGTT TCGGCAACGC CAGAGGCAGT ACCAGAGACT
GATGAGAGTT GGGCTGAGAT TATTGAGTTT GGCTTATTAA GCGCTGAAGA GATCGCGTTG
CTTCAGTCTC ATTCTCTCTC TGCGCCGACT CTCGGCTACG AATTGCAAAA TGATGAAGGT
GAAATTATTG CGGAAGCCGA TCTCGCCTGG CCATCACAAA AATGGGCATT GATTATTGAT
AATCAAGAAT TTATTCCATT ATTCACAACC AGGGGTTGGC ACGTTGCATT CGGGCCAATT
GACGAAAATA CATTGCAACA TCTGTCCGGA GGTGACAAAT GA
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| Protein sequence | MLPSVVSRQV ADSVAAFLRA AFPLNSPLFN GENNDNVSML EQFLAQPETL LKGPYLSAQL
PFRKSDLPLN FFPNLTLPFP PHAHQARAFQ RLGSDAPQPT LVATGTGSGK TECFMFPLLN
HCAGASQAGV KAIIIYPMNA LATDQASRFA KTIASDPQLH GKVTVGLFVG DSEIEPSKKM
SAEKVITCKH TLRESPPDIL LTNYKMLDYL LMRPGDQPLW RYNQPGSLRY LVVDELHTFD
GAQGSDLACL VRRLKHHIGV DNQRFACVGT SATVGDELGQ LLDYAKTIFD QPFTDDAVIR
EDRYTAAEYL QDYAIAYSQY PGPEVASALD PQSYATPVAY LNGQIPLWFP DSDLQLPDDL
ESDDGREKRI ALGSLLRRHS VMHVLLHDLQ GGILSERECL ENLQVMLAES ADHARRVLQS
ILALIAQARL EVPETEHDRQ KRLQAKKARP VLPFVQLRSQ LWLREMRRLV ASVAKTPRLV
FADDVAVEDR EHYLPVIHCR DCHATGWASQ RHGQSVQLET DLDGIYRQFF EKGRSIVLAF
PDNNEKAVSG AHQKLCPTCL KLNRQSSVQC GHCGHTELLQ VLIPDMLKER KDELEFANEC
PYCNSKQGIS ILGSRAASLS AVMIHQLYGS QFNEHKKLIT FSDSVQDAAH RASFFTARTW
PLMIRGQIAS VLGEKETLPL DAFAARVCQQ TRERSPDDAH FAANFIAPNM QWLNDYQTLK
NEGKLAENSD LPELVSLRLD WEVYSEFTLR ARIGRTLEAT GYAVAGVDKD RFNPAITALH
QQLCEELGDE MSGVSVEQVA HLALGVIWYQ RQAGAVMHPA FESYRRDGTT FMMTQKERTS
RYMPSIGPKT RKPAYASFEK INGFHRLIGA KSNPSWYQHW INRTLSNGNN LFISSVAETV
LRRLFTALKI AGVVKDFDTK GREAWGLVPS ALVVSRDVVQ LNCSCCREVV RAPADQGWQW
RNAPCLSLRC EGRYQEVDNM ATWRWENMDI ARVQGAEHTG LLSREDREAT EKSFYRGNQP
WNINLLSATP TLEMGIDVGD LSTVLLCSVP PAQANYLQRI GRAGRKDGNA LNITVAEGNP
HDQFFFEEPL EMMQGQVQAP GVFLNATAIL ERQLAAFCMD NWVKTGVPES AICKNVKQML
DELEFGRKSG FPYNLLRYIE QHHAEIAAQF TAIFPDLAAE TRQQLLSYLQ GAPGQRSLVQ
RIEEALKLLV EDRKSLRSRI DKLKRSIDKL ENAPRDQNFD SDMRELTSER QALMALVNQI
NNKQTLNFLT DEGLLPNYAF PEAGITLRSV LWRRKEGGEA REYQNTTFEY ERPASTALAE
LAPLNNFYAG GHKVEIEQID LKVSEPENWR ICSHCNYSEN IDQTGDQHKY CPKCGTPGWA
DAGQKTTLLK LRQVYARASA RDSQISDESD SREPAFFQRQ LLVSFEKEDV SAAYAIEEGE
VPFGFEFLSK VTLRDINFGK MADDANELMI AGEAKKRTGF KVCLGCGMVQ RPRDHEPRHD
LSCKYRTEPE KAKFEDYLYL YRQLESEALR ILLPVSSYSN DRVVEASLGA AIQLGLKHYF
KGNVDHLKGV VYREPENEGE SWRQYLVIYD TVPGGTGSLK ELMRTPDNLL KLLELAYQAI
VECSCNHDTH KDGCYRCVYA YRDRGRMKYV SRDQARLLLA KILQARESIR VIDSIKNISL
EAMMGSELEK RFISCLQENK NLIVSRSYAH QGAGWIINTR SEPMMSWHLK AQVDLGAKEA
VGIPCRPDYV LYPLMQSDAI KPVAIFLDGF AFHKNSVAED VQKRQAIRDS GNFWVWTVTW
ADLKEPGLKH VQDVLGLGHN PDMKQPKFYN LFHDTNFAAL EASFRERNSF ALLLDYLADP
GGRTQLWQKM AAAHAWMWLD VKKSQDAGTK QKYAYEMQEN APDWRLAELL PDEPFVFGGL
LDSCNSSQQF IELASVLPQQ AIKPTTSVAQ MRSWLRLHIC FDDRYTQDDG YEAGLNGFWR
LVNLLQFLPD ITFTSRKAVH LPQESVDTKV SATPEAVPET DESWAEIIEF GLLSAEEIAL
LQSHSLSAPT LGYELQNDEG EIIAEADLAW PSQKWALIID NQEFIPLFTT RGWHVAFGPI
DENTLQHLSG GDK
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