Gene EcolC_3859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3859 
Symbol 
ID6064437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4217710 
End bp4218069 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content54% 
IMG OID641603274 
Productfumarate reductase subunit D 
Protein accessionYP_001726790 
Protein GI170021836 
COG category[C] Energy production and conversion 
COG ID[COG3080] Fumarate reductase subunit D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00901601 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCAATC CAAATCCAAA GCGTTCTGAC GAACCGGTAT TCTGGGGCCT CTTCGGGGCC 
GGTGGTATGT GGAGCGCAAT TATTGCGCCG GTGATGATCC TGCTGGTGGG TATTCTGCTG
CCGCTGGGGC TGTTTCCGGG TGATGCACTG AGCTACGAGC GCGTTCTGGC GTTCGCGCAG
AGCTTCATTG GTCGCGTATT CCTGTTCCTG ATGATCGTTC TGCCGCTGTG GTGTGGTTTA
CACCGTATGC ACCACGCGAT GCACGATCTG AAAATCCACG TACCTGCGGG CAAATGGGTT
TTCTACGGTC TGGCTGCTAT CCTGACAGTT GTCACGCTGA TTGGTGTCGT TACAATCTAA
 
Protein sequence
MINPNPKRSD EPVFWGLFGA GGMWSAIIAP VMILLVGILL PLGLFPGDAL SYERVLAFAQ 
SFIGRVFLFL MIVLPLWCGL HRMHHAMHDL KIHVPAGKWV FYGLAAILTV VTLIGVVTI