Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3826 |
Symbol | |
ID | 6065082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 4181176 |
End bp | 4182801 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641603238 |
Product | isovaleryl CoA dehydrogenase |
Protein accession | YP_001726757 |
Protein GI | 170021803 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000253189 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCACTGGC AAACTCACAC CGTTTTTAAT CAACCTATAC CATTAAATAA CAGCAACTTA TACCTGTCTG ATGGCGCGCT CTGCGAAGCG GTAACGCGTG AAGGTGCTGG CTGGGATAGC GATTTTCTAG CCAGTATTGG TCAGCAGTTA GGAACGGCTG AATCCCTTGA ACTGGGGCGG CTGGCGAATG TGAATCCGCC TGAATTATTG CGCTACGATG CGCAAGGACG CCGTCTGGAC GATGTGCGTT TTCACCCCGC CTGGCACCTG CTGATGCAGG CGCTATGTAC CAATCGGGTG CACAATCTTG CCTGGGAAGA AGACGCTCGC TCCGGCGCAT TTGTGGCGCG CGCGGCGCGT TTTATGTTAC ATGCGCAGGT TGAGGCAGGG TCGTTATGTC CGATAACCAT GACCTTTGCC GCCACGCCAT TGTTGTTACA GATGTTACCC GCGCCGTTTC AGGACTGGAC CACGCCGCTA TTGAGCGATC GCTACGATTC TCACTTATTG CCAGGTGGGC AAAAACGCGG TTTGTTGATT GGCATGGGAA TGACGGAAAA GCAGGGCGGT TCCGATGTTA TGAGCAACAC CACCCGTGCA GAGCGTCTGG AAGATGGCTC TTATCGGCTG GTGGGGCATA AATGGTTTTT CTCGGTTCCG CAAAGCGATG CGCATCTGGT GCTGGCGCAG ACCGCGGGTG GTCTGTCCTG CTTTTTTGTG CCGCGCTTTT TGCCTGACGG GCAACGCAAC GCGATTCGCC TCGAGCGGCT GAAAGATAAG CTGGGTAATC GCTCTAACGC CAGTTGCGAA GTGGAGTTTC AGGATGCCAT TGGTTGGTTG TTGGGGCAGG AAGGGGAAGG AATTCGTCTG ATCCTGAAAA TGGGTGGGAT GACGCGTTTT GATTGCGCCC TGGGTAGCCA TGCCATGATG CGCCGTGCAT TTTCGCTGGC GATTTATCAT GCACATCAAC GCCATGTTTT TGGTAATCCA TTGATCCAAC AGCCCCTTAT GCGTCATGTC TTAAGTCGCA TGGCACTTCA GCTTGAAGGG CAAACGGCGT TGCTGTTTCG TCTTGCGCGA GCGTGGGACC GGCGTGCCGA TGCCAAAGAA GCCCTGTGGG CGCGTTTATT TACGCCTGCG GCAAAATTTG TGATCTGCAA AAGAGGTATG CCGTTTGTGG CCGAAGCGAT GGAGGTGCTG GGCGGCATTG GTTATTGCGA GGAGAGCGAG CTGCCGCGGC TTTACCGGGA GATGCCGGTA AACAGTATTT GGGAAGGTTC CGGCAATATT ATGTGCCTGG ATGTGTTGCG CGTTCTCAAT AAGCAAGCGG GCGTATACGA CTTATTGTCG GAAGCATTTG TGGAAGTGAA AGGGCAGGAT CGCTATTTTG ATCGCGCGGT TCGTCGTTTA CAGCAGCAGC TGCGTAAGCC AGCTGAAGAA CTGGGGCGAG AGATTACTCA TCAGCTATTC CTGCTGGGCT GCGGTGCGCA AATGTTGAAA TATGCTTCTC CGCCAATGGC GCAGGCGTGG TGTCAGGTGA TGTTAGATAC GCGCGGCGGC GTACGGTTGT CAGAGCAGAT CCAGAATGAT TTATTGCTGC GGGCGACGGG GGGAGTGTGT GTGTAA
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Protein sequence | MHWQTHTVFN QPIPLNNSNL YLSDGALCEA VTREGAGWDS DFLASIGQQL GTAESLELGR LANVNPPELL RYDAQGRRLD DVRFHPAWHL LMQALCTNRV HNLAWEEDAR SGAFVARAAR FMLHAQVEAG SLCPITMTFA ATPLLLQMLP APFQDWTTPL LSDRYDSHLL PGGQKRGLLI GMGMTEKQGG SDVMSNTTRA ERLEDGSYRL VGHKWFFSVP QSDAHLVLAQ TAGGLSCFFV PRFLPDGQRN AIRLERLKDK LGNRSNASCE VEFQDAIGWL LGQEGEGIRL ILKMGGMTRF DCALGSHAMM RRAFSLAIYH AHQRHVFGNP LIQQPLMRHV LSRMALQLEG QTALLFRLAR AWDRRADAKE ALWARLFTPA AKFVICKRGM PFVAEAMEVL GGIGYCEESE LPRLYREMPV NSIWEGSGNI MCLDVLRVLN KQAGVYDLLS EAFVEVKGQD RYFDRAVRRL QQQLRKPAEE LGREITHQLF LLGCGAQMLK YASPPMAQAW CQVMLDTRGG VRLSEQIQND LLLRATGGVC V
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