| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3796 |
|---|
| Symbol | |
|---|
| ID | 6067652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 4155662 |
|---|
| End bp | 4156627 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641603209 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001726728 |
|---|
| Protein GI | 170021774 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0293258 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAGCG GCGTGCTGTA CGCCCTGTTA GCAGGGTTGA TGTGGGGGCT TATTTTTGTC
GGGCCGTTGA TCGTGCCGGA ATACCCGGCG ATGTTGCAGT CGATGGGGCG TTATCTGGCG
TTAGGGTTAA TTGCGCTACC CATTGCCTGG CTGGGACGCG TGCGTCTGCG TCAGTTGGCG
CGTCGCGACT GGCTTACCGC CTTGATGCTC ACTATGATGG GCAACCTCAT CTATTACTTC
TGCCTTGCCA GTGCCATTCA ACGTACTGGC GCGCCTGTTT CTACGATGAT TATTGGCACC
CTGCCGGTGG TCATTCCTGT CTTTGCCAAT CTGCTTTATA GCCAGCGCGA CGGCAAACTC
GCGTGGGGAA AACTCGCCCC GGCACTGATT TGTATTGGCA TCGGCCTGGC GTGTGTGAAT
ATTGCTGAGT TAAACCACGG ACTCCCCGAT TTTGACTGGG CACGTTATAC CTCTGGCATC
GTGCTAGCGT TAGTTTCCGT GGTCTGCTGG GCATGGTATG CCCTGCGTAA CGCCCGCTGG
CTGCGGGAAA ATCCCGACAA ACATCCGATG ATGTGGGCGA CGGCGCAGGC GCTGGTCACG
CTGCCGGTTT CTCTCATCGG CTATCTCGTC GCCTGTTACT GGCTGAATAT ACAAACGCCG
GACTTCTCCT TACCTTTTGG CCCCCGTCCG CTGGTGTTTA TTAGTCTGAT GGTTGCGATA
GCCGTGCTTT GCTCATGGGT TGGCGCACTC TGCTGGAACG TCGCCAGCCA GCGATTACCG
ACAGTGATTC TCGGGCCGCT GATCGTTTTC GAAACACTGG CAGGTTTGCT GTACACCTTT
TTGATACGCC AGCAAATGCC GCCGCTGATG ACGCTGAGCG GTATCGCGCT GTTAGTGGTT
GGCGTGGTCA TTGCAGTCAG AGCAAAACCG GAAAAGCCTT TAACTGAATC TGTCTCAGAA
AGTTGA
|
|---|
| Protein sequence | MISGVLYALL AGLMWGLIFV GPLIVPEYPA MLQSMGRYLA LGLIALPIAW LGRVRLRQLA
RRDWLTALML TMMGNLIYYF CLASAIQRTG APVSTMIIGT LPVVIPVFAN LLYSQRDGKL
AWGKLAPALI CIGIGLACVN IAELNHGLPD FDWARYTSGI VLALVSVVCW AWYALRNARW
LRENPDKHPM MWATAQALVT LPVSLIGYLV ACYWLNIQTP DFSLPFGPRP LVFISLMVAI
AVLCSWVGAL CWNVASQRLP TVILGPLIVF ETLAGLLYTF LIRQQMPPLM TLSGIALLVV
GVVIAVRAKP EKPLTESVSE S
|
|---|
| |