Gene EcolC_3795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3795 
Symbol 
ID6067296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4154693 
End bp4155553 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content54% 
IMG OID641603208 
ProductNmrA family protein 
Protein accessionYP_001726727 
Protein GI170021773 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0702] Predicted nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.221042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCTA TTACTGGTGC CACTGGCCAA CTTGGTCACT ATGTTATTAA ATCCTTGATG 
AAAACGGTTC CTGCCAGCCA AATAGTGGCT ATCGTTCGTA ATCCGGCAAA AGCCCAGGCA
CTGACAGCAC AAGGCATTAC CGTGCGTCAG GCTGACTACG GCGATGAAGC CGCACTGACA
TCTGCACTTC AGGGAGTGGA AAAACTACTG CTGATCTCTT CCAGCGAAGT GGGTCAACGT
GCCCCGCAGC ATCGTAATGT TATTAATGCC GCAAAGACGG CTGGCGTGAA ATTTATCGCT
TATACCAGTC TGCTTCACGC GGATAAATCT CCGCTCGGCC TCGCCGATGA GCACATCGAG
ACGGAGAAAA TGTTGGCTGA TTCTGGCATC GTTTACACCC TGCTGCGCAA CGGCTGGTAC
ACCGAAAACT ATCTCGCCAG CGCCCCGGCA GCACTGGAGC ACGGCGTATT TATCGGTGCC
GCGGGCGATG GCAAAATTGC CTCGGCAACG CGGGCAGATT ATGCGGCAGC TGCGGCACGC
GTGATTAGCG AAGCCGGTCA CGAAGGCAAG GTTTACGAGC TGGCGGGCGA TAGTGCCTGG
ACGTTGACAC AGTTAGCGGC AGAGCTGACC AAACAGAGCG GCAAACAGGT TACCTATCAA
AATCTGAGCG AAACCGATTT CGCTGCGGCG CTGAAAAGCG TTGGCCTGCC TGACGGACTG
GCGGATATGC TGGCGGATTC TGACGTTGGC GCATCGAAAG GCGGTCTGTT TGATGACAGC
AAAACGCTGA GCAAATTGAT TGGCCGCCCA ACGACAACGT TAGCCGAAAG CGTAAGCCAT
CTTTTTAATG TTAATAAATA G
 
Protein sequence
MIAITGATGQ LGHYVIKSLM KTVPASQIVA IVRNPAKAQA LTAQGITVRQ ADYGDEAALT 
SALQGVEKLL LISSSEVGQR APQHRNVINA AKTAGVKFIA YTSLLHADKS PLGLADEHIE
TEKMLADSGI VYTLLRNGWY TENYLASAPA ALEHGVFIGA AGDGKIASAT RADYAAAAAR
VISEAGHEGK VYELAGDSAW TLTQLAAELT KQSGKQVTYQ NLSETDFAAA LKSVGLPDGL
ADMLADSDVG ASKGGLFDDS KTLSKLIGRP TTTLAESVSH LFNVNK