| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3780 |
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| Symbol | |
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| ID | 6066882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 4135889 |
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| End bp | 4136884 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641603193 |
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| Product | inner membrane ABC transporter permease protein YjfF |
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| Protein accession | YP_001726712 |
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| Protein GI | 170021758 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | [TIGR01222] septum site-determining protein MinC |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.948724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATAAAAC GTAATTTGCC ACTGATGATC ACCATCGGCG TCTTTGTGTT GGGTTATCTT
TACTGCCTGA CCCAGTTTCC CGGTTTTGCT TCCACAAGAG TGATCTGCAA TATCCTGACC
GATAACGCCT TTCTTGGGAT CATTGCCGTT GGCATGACCT TTGTGATCCT CTCCGGTGGG
ATCGATCTCT CCGTCGGTTC GGTGATCGCC TTTACTGGCG TGTTTCTGGC AAAAGTGATT
GGCGATTTCG GCCTCTCGCC GCTACTGGCG TTTCCGCTAG TGCTGGTGAT GGGCTGTGCC
TTCGGCGCAT TTATGGGGCT TTTGATCGAC GCCCTGAAGA TCCCGGCATT TATCATTACC
CTGGCGGGGA TGTTCTTTTT GCGCGGTGTC AGCTATCTCG TTTCGGAAGA GTCGATTCCG
ATAAACCATC CCATTTATGA CACGCTCTCA AGCCTTGCGT GGAAAATCCC TGGCGGCGGT
CGCTTAAGTG CGATGGGACT GCTGATGTTG GCGGTGGTGG TTATCGGTAT TTTCCTCGCG
CATCGTACCC GTTTTGGTAA TCAGGTATAC GCCATTGGCG GCAACGCAAC GTCGGCGAAC
CTGATGGGGA TTTCCACTCG CAGCACCACT ATTCGCATTT ATATGCTCTC CACCGGACTG
GCAACGCTGG CGGGGATTGT CTTCTCGATT TATACCCAGG CCGGATATGC GCTGGCGGGC
GTAGGTGTGG AACTGGATGC TATCGCCTCA GTGGTAATTG GCGGTACGCT TCTGAGCGGT
GGCGTTGGAA CGGTATTAGG GACGCTTTTT GGCGTGGCGA TTCAGGGACT GATTCAGACT
TACATAAACT TTGATGGCAC GCTGAGCTCA TGGTGGACGA AAATCGCCAT CGGTATTTTG
TTGTTTATTT TTATAGCATT ACAGCGTGGA TTAACGGTGC TGTGGGAGAA TCGTCAGAGT
TCGCCAGTGA CAAGAGTCAA CATTGCGCAG CGATAA
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| Protein sequence | MIKRNLPLMI TIGVFVLGYL YCLTQFPGFA STRVICNILT DNAFLGIIAV GMTFVILSGG
IDLSVGSVIA FTGVFLAKVI GDFGLSPLLA FPLVLVMGCA FGAFMGLLID ALKIPAFIIT
LAGMFFLRGV SYLVSEESIP INHPIYDTLS SLAWKIPGGG RLSAMGLLML AVVVIGIFLA
HRTRFGNQVY AIGGNATSAN LMGISTRSTT IRIYMLSTGL ATLAGIVFSI YTQAGYALAG
VGVELDAIAS VVIGGTLLSG GVGTVLGTLF GVAIQGLIQT YINFDGTLSS WWTKIAIGIL
LFIFIALQRG LTVLWENRQS SPVTRVNIAQ R
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