| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3776 |
|---|
| Symbol | |
|---|
| ID | 6066604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 4131156 |
|---|
| End bp | 4132508 |
|---|
| Gene Length | 1353 bp |
|---|
| Protein Length | 450 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641603189 |
|---|
| Product | peptidase PmbA |
|---|
| Protein accession | YP_001726708 |
|---|
| Protein GI | 170021754 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACTTG CAATGAAAGT AATCTCTCAA GTTGAAGCGC AGCGCAAGAT TCTGGAAGAA
GCAGTTTCCA CTGCGCTGGA GTTGGCCTCA GGCAAATCGG ACGGTGCGGA AGTTGCCGTC
AGCAAGACCA CCGGCATTAG CGTAAGCACG CGTTATGGTG AAGTGGAGAA TGTTGAATTC
AATAGCGATG GCGCGCTGGG GATCACTGTT TATCACCAGA ACCGCAAAGG TAGCGCATCA
TCCACCGATT TAAGCCCGCA GGCCATTGCC CGCACCGTAC AGGCGGCGCT GGATATTGCC
CGTTATACCT CGCCAGATCC CTGTGCCGGC GTGGCAGACA AAGAGCTGCT GGCCTTTGAG
GCACCGGATC TCGATTTGTT CCACCCTGCG GAAGTTTCCC CGGATGAAGC CATTGAACTG
GCGGCCCGCG CAGAACAGGC AGCATTACAG GCGGACAAAC GTATCACCAA TACCGAAGGT
GGCAGCTTTA ACAGCCACTA CGGTGTCAAA GTTTTTGGCA ACAGCCACGG CATGTTGCAG
GGTTACTGCT CTACGCGTCA TTCGCTCTCC AGCTGTGTAA TTGCCGAAGA AAATGGCGAT
ATGGAGCGTG ATTACGCCTA CACCATTGGT CGTGCGATGA GCGATCTGCA AACGCCAGAG
TGGGTTGGGG CCGACTGTGC TCGCCGTACT TTATCGCGCC TGTCACCGCG TAAACTCTCC
ACCATGAAAG CGCCGGTCAT TTTTGCCAAT GAAGTGGCAA CCGGGCTTTT TGGGCATCTG
GTGGGGGCGA TAGCGGGTGG AGCGGTTTAC CGTAAATCTA CCTTCCTGCT GGATTCGCTG
GGTAAACAAA TTCTGCCGGA CTGGCTGACC ATTGAAGAGC ATCCGCATCT GCTGAAAGGG
CTGGCATCGA CGCCATTTGA CAGCGAAGGT GTGCGCACCG AGCGTCGCGA TATTATTAAA
GATGGCATCC TGACTCAGTG GCTGCTGACC AGCTATTCGG CGCGAAAACT GGGGCTGAAA
AGCACCGGAC ATGCGGGCGG TATTCACAAC TGGCGGATTG CCGGACAAGG GCTAAGCTTC
GAACAAATGC TCAAAGAGAT GGGCACCGGG CTGGTGGTGA CGGAGCTGAT GGGCCAGGGC
GTGAGTGCAA TTACCGGTGA TTATTCCCGT GGTGCGGCGG GCTTCTGGGT AGAAAACGGC
GAAATTCAGT ATCCGGTTAG CGAAATCACC ATCGCAGGTA ATTTAAAAGA TATGTGGCGC
AATATTGTCA CCGTCGGTAA CGATATTGAA ACACGCAGTA ATATACAGTG TGGTTCTGTG
CTGTTGCCGG AGATGAAAAT CGCCGGGCAG TAA
|
|---|
| Protein sequence | MALAMKVISQ VEAQRKILEE AVSTALELAS GKSDGAEVAV SKTTGISVST RYGEVENVEF
NSDGALGITV YHQNRKGSAS STDLSPQAIA RTVQAALDIA RYTSPDPCAG VADKELLAFE
APDLDLFHPA EVSPDEAIEL AARAEQAALQ ADKRITNTEG GSFNSHYGVK VFGNSHGMLQ
GYCSTRHSLS SCVIAEENGD MERDYAYTIG RAMSDLQTPE WVGADCARRT LSRLSPRKLS
TMKAPVIFAN EVATGLFGHL VGAIAGGAVY RKSTFLLDSL GKQILPDWLT IEEHPHLLKG
LASTPFDSEG VRTERRDIIK DGILTQWLLT SYSARKLGLK STGHAGGIHN WRIAGQGLSF
EQMLKEMGTG LVVTELMGQG VSAITGDYSR GAAGFWVENG EIQYPVSEIT IAGNLKDMWR
NIVTVGNDIE TRSNIQCGSV LLPEMKIAGQ
|
|---|
| |