Gene EcolC_3743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3743 
Symbol 
ID6067380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4095489 
End bp4096391 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content50% 
IMG OID641603159 
ProductFimH mannose-binding domain-containing protein 
Protein accessionYP_001726679 
Protein GI170021725 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0870674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAG TTATTACCCT GTTTGCTGTA CTGCTGATGG GCTGGTCGGT AAATGCCTGG 
TCATTCGCCT GTAAAACCGC CAATGGTACA GCTATCCCTA TTGGCGGTGG CAGCGCTAAT
GTTTATGTAA ACCTTGCGCC TGCCGTGAAT GTGGGGCAAA ACTTGGTCGT AGATCTTTCG
ACGCAAATCT TTTGCCATAA CGATTATCCG GAAACCATTA CAGACTATGT CACACTGCAA
CGAGGCTCGG CTTATGGCGG CGTGTTATCT AATTTTTCCG GGACCGTAAA ATATAGTGGC
AGTAGCTATC CATTTCCGAC CACCAGCGAA ACGCCGCGCG TTGTTTATAA TTCGAGAACG
GATAAGCCGT GGCCGGTGGC GCTTTATTTG ACGCCTGTGA GCAGTGCGGG CGGGGTGGCG
ATTAAAGCTG GCTCATTAAT TGCCGTGCTT ATTTTGCGAC AGACCAACAA CTATAACAGC
GATGATTTCC AGTTTGTGTG GAATATTTAC GCCAATAATG ATGTGGTGGT GCCTACTGGC
GGCTGTGATG TTTCTGCTCG TGATGTCACC GTTACTCTGC CGGACTACCC TGGTTCAGTG
CCAATTCCTC TTACCGTTTA TTGTGCGAAA AGCCAAAATC TGGGGTATTA CCTCTCCGGC
ACAACCGTAG ATGCGGGCAA CTCGATTTTC ACCAATACCG CGTCGTTTTC ACCAGCGCAG
GGCGTCGGCG TACAGTTGAC GCGCAACGGT ACGATTATTC CAGCGAATAA CACGGTATCG
TTAGGAGCAG TAGGGACTTC GGCGGTAAGT CTGGGATTAA CGGCAAATTA CGCACGTACC
GGAGGGCAGG TGACTGCAGG GAATGTGCAA TCGATTATTG GCGTGACTTT TGTTTATCAA
TAA
 
Protein sequence
MKRVITLFAV LLMGWSVNAW SFACKTANGT AIPIGGGSAN VYVNLAPAVN VGQNLVVDLS 
TQIFCHNDYP ETITDYVTLQ RGSAYGGVLS NFSGTVKYSG SSYPFPTTSE TPRVVYNSRT
DKPWPVALYL TPVSSAGGVA IKAGSLIAVL ILRQTNNYNS DDFQFVWNIY ANNDVVVPTG
GCDVSARDVT VTLPDYPGSV PIPLTVYCAK SQNLGYYLSG TTVDAGNSIF TNTASFSPAQ
GVGVQLTRNG TIIPANNTVS LGAVGTSAVS LGLTANYART GGQVTAGNVQ SIIGVTFVYQ