| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3712 |
|---|
| Symbol | |
|---|
| ID | 6067176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 4063062 |
|---|
| End bp | 4065212 |
|---|
| Gene Length | 2151 bp |
|---|
| Protein Length | 716 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641603130 |
|---|
| Product | carbon starvation protein CstA |
|---|
| Protein accession | YP_001726650 |
|---|
| Protein GI | 170021696 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.356115 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATACGA AAAAACTATT CAAGCACATA CCCTGGGTGA TTCTCGGAAT CATCGGTGCA
TTCTGCCTCG CGGTAGTTGC ATTACGTCGG GGGGAGCACG TCAGCGCCCT GTGGATCGTG
GTCGCCTCTG TGTCGGTGTA TCTGGTGGCG TATCGCTACT ACAGTCTGTA CATCGCCCAG
AAGGTGATGA AACTCGACCC CACGCGCGCG ACGCCTGCGG TTATTAACAA CGACGGTCTG
AACTACGTTC CGACCAACCG TTACGTGTTG TTTGGTCACC ACTTCGCCGC TATCGCCGGT
GCTGGTCCGC TGGTCGGTCC GGTTCTCGCC GCACAGATGG GCTACCTGCC TGGCACGCTG
TGGCTGCTGG CGGGGGTAGT ACTGGCCGGT GCGGTTCAGG ACTTTATGGT GCTGTTTATC
TCCTCTCGCC GTAACGGCGC ATCTCTCGGT GAGATGATAA AAGAAGAGAT GGGACCAGTA
CCGGGGACTA TCGCGCTGTT TGGCTGTTTC TTAATCATGA TCATCATCCT TGCCGTCCTG
GCGCTGATTG TGGTTAAAGC CCTGGCCGAA AGTCCGTGGG GTGTCTTCAC CGTTTGCTCA
ACCGTACCGA TTGCGCTGTT TATGGGTATC TACATGCGCT TTATCCGTCC GGGGCGTGTG
GGTGAAGTCT CTGTAATCGG TATCGTGCTG CTGGTTGCCT CTATCTACTT CGGTGGCGTG
ATTGCTCACG ATCCGTACTG GGGTCCGGCA CTGACCTTTA AAGACACCAC CATTACCTTC
GCGCTGATTG GCTATGCGTT TGTTTCCGCA CTGCTGCCGG TGTGGCTGAT CCTCGCACCG
CGCGACTATC TGGCAACCTT CCTGAAAATC GGCGTTATCG TCGGCCTGGC GTTGGGTATC
GTGGTGCTGA ACCCGGAACT GAAAATGCCT GCGATGACCC AGTACATTGA CGGTACTGGC
CCGCTGTGGA AAGGCGCTCT GTTCCCGTTC CTGTTCATCA CCATCGCCTG TGGTGCGGTA
TCTGGCTTCC ACGCGCTGAT CTCTTCCGGT ACGACGCCGA AACTGCTGGC TAACGAAACC
GACGCGCGTT TCATTGGCTA CGGCGCAATG CTGATGGAGT CCTTCGTGGC GATTATGGCG
CTGGTTGCAG CGTCCATCAT CGAACCGGGT CTTTACTTCG CGATGAACAC CCCGCCTGCG
GGCCTTGGCA TCACCATGCC TAACCTGCAT GAAATGGGTG GCGAGAACGC GCCGATCATC
ATGGCGCAGC TGAAAGACGT TACCGCACAC GCGGCGGCGA CCGTCAGCTC CTGGGGCTTC
GTGATTTCGC CAGAGCAGAT CCTGCAAACC GCGAAAGACA TTGGTGAGCC TTCTGTCCTG
AACCGTGCAG GTGGTGCGCC GACACTGGCG GTAGGTATCG CGCACGTGTT CCACAAAGTG
CTGCCGATGG CTGACATGGG CTTCTGGTAT CACTTCGGTA TTCTGTTCGA AGCCCTGTTC
ATCCTGACCG CGCTGGATGC GGGTACCCGT TCTGGCCGCT TTATGCTGCA GGACCTGCTG
GGTAACTTCA TCCCGTTCCT GAAAAAAACC GACTCTCTGG TTGCTGGTAT CATCGGTACT
GCGGGCTGTG TGGGTCTGTG GGGCTACCTG CTGTATCAGG GCGTGGTCGA TCCGCTGGGC
GGCGTTAAGA GCCTGTGGCC GCTGTTCGGT ATTTCCAACC AGATGCTGGC AGCCGTAGCG
CTGGTACTGG GCACCGTTGT GCTGATTAAG ATGAAGCGCA CCCAATACAT CTGGGTAACT
GTTGTTCCGG CTGTATGGCT GCTTATCTGC ACCACCTGGG CGCTGGGCCT GAAACTGTTC
AGCACCAACC CGCAGATGGA AGGCTTCTTC TACATGGCAA GCCAGTACAA AGAGAAGATT
GCTAACGGTA CTGACCTGAC GGCGCAGCAG ATTGCCAACA TGAACCACAT CGTTGTGAAC
AACTACACCA ACGCAGGCCT GAGTATTCTG TTCCTGATTG TGGTGTACAG CATCATCTTC
TACGGTTTCA AAACCTGGCT GAAGGTGCGT AACAGCGACA AACGTACTGA CAAAGAAACT
CCGTACGTTC CAATCCCGGA AGGCGGCGTG AAGATCTCTT CGCACCACTA A
|
|---|
| Protein sequence | MDTKKLFKHI PWVILGIIGA FCLAVVALRR GEHVSALWIV VASVSVYLVA YRYYSLYIAQ
KVMKLDPTRA TPAVINNDGL NYVPTNRYVL FGHHFAAIAG AGPLVGPVLA AQMGYLPGTL
WLLAGVVLAG AVQDFMVLFI SSRRNGASLG EMIKEEMGPV PGTIALFGCF LIMIIILAVL
ALIVVKALAE SPWGVFTVCS TVPIALFMGI YMRFIRPGRV GEVSVIGIVL LVASIYFGGV
IAHDPYWGPA LTFKDTTITF ALIGYAFVSA LLPVWLILAP RDYLATFLKI GVIVGLALGI
VVLNPELKMP AMTQYIDGTG PLWKGALFPF LFITIACGAV SGFHALISSG TTPKLLANET
DARFIGYGAM LMESFVAIMA LVAASIIEPG LYFAMNTPPA GLGITMPNLH EMGGENAPII
MAQLKDVTAH AAATVSSWGF VISPEQILQT AKDIGEPSVL NRAGGAPTLA VGIAHVFHKV
LPMADMGFWY HFGILFEALF ILTALDAGTR SGRFMLQDLL GNFIPFLKKT DSLVAGIIGT
AGCVGLWGYL LYQGVVDPLG GVKSLWPLFG ISNQMLAAVA LVLGTVVLIK MKRTQYIWVT
VVPAVWLLIC TTWALGLKLF STNPQMEGFF YMASQYKEKI ANGTDLTAQQ IANMNHIVVN
NYTNAGLSIL FLIVVYSIIF YGFKTWLKVR NSDKRTDKET PYVPIPEGGV KISSHH
|
|---|
| |