| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_3505 |
|---|
| Symbol | |
|---|
| ID | 6068557 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 3824911 |
|---|
| End bp | 3826191 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641602922 |
|---|
| Product | glutamate-1-semialdehyde aminotransferase |
|---|
| Protein accession | YP_001726446 |
|---|
| Protein GI | 170021492 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
|---|
| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0155655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGT CTGAAAATCT TTACAGCGCA GCGCGCGAGC TGATCCCTGG CGGTGTGAAC
TCCCCTGTTC GCGCCTTTAC TGGCGTGGGC GGCACTCCAC TGTTTATCGA AAAAGCGGAC
GGCGCTTATC TGTACGATGT TGATGGCAAA GCCTATATCG ATTATGTCGG TTCCTGGGGG
CCGATGGTGC TGGGCCATAA CCATCCGGCA ATCCGCAATG CCGTGATTGA AGCCGCCGAG
CGTGGTTTAA GCTTTGGTGC ACCAACCGAA ATGGAAGTGA AAATGGCGCA ACTGGTGACC
GAACTGGTCC CGACCATGGA TATGGTGCGC ATGGTGAACT CCGGCACTGA AGCGACCATG
AGCGCCATCC GCCTGGCCCG TGGTTTTACC GGTCGCGACA AAATTATTAA ATTTGAAGGT
TGTTACCACG GTCACGCTGA CTGCCTGCTG GTGAAAGCCG GTTCTGGCGC ACTCACGTTA
GGCCAGCCAA ACTCGCCGGG CGTTCCGGCA GATTTCGCCA AACATACCTT AACCTGTACT
TATAACGATC TGGCTTCTGT ACGCGCCGCG TTTGAGCAAT ACCCGCAAGA GATTGCCTGT
ATTATCGTCG AGCCGGTGGC AGGCAATATG AACTGCGTTC CACCGCTGCC AGAGTTCCTG
CCAGGTCTGC GTGCGCTGTG CGACGAATTT GGCGCATTGC TGATCATCGA TGAAGTAATG
ACCGGCTTCC GCGTGGCACT GGCTGGCGCA CAGGATTATT ACGGTGTGGA ACCGGATCTC
ACCTGCCTGG GCAAAATCAT CGGCGGTGGA ATGCCGGTAG GCGCATTCGG TGGTCGTCGT
GATGTAATGG ATGCGCTGGC CCCGACGGGT CCGGTCTATC AGGCGGGTAC GCTTTCCGGT
AACCCAATTG CGATGGCAGC GGGTTTCGCC TGTCTGAATG AAGTCGCGCA GCCGGGCGTT
CACGAAACGT TGGATGAGCT GACATCACGT CTGGCAGAAG GTCTGCTGGA AGCGGCAGAA
GAAGCCGGAA TTCCGCTGGT CGTTAACCAC GTTGGCGGCA TGTTCGGTAT TTTCTTTACC
GACGCCGAGT CCGTGACGTG CTATCAGGAT GTGATGGCCT GTGACGTGGA ACGCTTTAAG
CGTTTCTTCC ATATGATGCT GGACGAAGGT GTTTACCTGG CACCGTCAGC GTTTGAAGCG
GGCTTTATGT CCGTGGCGCA CAGCATGGAA GATATCAATA ACACCATCGA TGCTGCACGT
CGGGTGTTTG CGAAGTTGTG A
|
|---|
| Protein sequence | MSKSENLYSA ARELIPGGVN SPVRAFTGVG GTPLFIEKAD GAYLYDVDGK AYIDYVGSWG
PMVLGHNHPA IRNAVIEAAE RGLSFGAPTE MEVKMAQLVT ELVPTMDMVR MVNSGTEATM
SAIRLARGFT GRDKIIKFEG CYHGHADCLL VKAGSGALTL GQPNSPGVPA DFAKHTLTCT
YNDLASVRAA FEQYPQEIAC IIVEPVAGNM NCVPPLPEFL PGLRALCDEF GALLIIDEVM
TGFRVALAGA QDYYGVEPDL TCLGKIIGGG MPVGAFGGRR DVMDALAPTG PVYQAGTLSG
NPIAMAAGFA CLNEVAQPGV HETLDELTSR LAEGLLEAAE EAGIPLVVNH VGGMFGIFFT
DAESVTCYQD VMACDVERFK RFFHMMLDEG VYLAPSAFEA GFMSVAHSME DINNTIDAAR
RVFAKL
|
|---|
| |