Gene EcolC_3279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3279 
Symbol 
ID6066679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3588607 
End bp3589452 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content55% 
IMG OID641602694 
ProductDNA-binding transcriptional activator MhpR 
Protein accessionYP_001726228 
Protein GI170021274 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000040145 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATTA ATATGCAGAA CAATGAGCAG ACGGAATACA AAACCGTGCG CGGCTTAACC 
CGCGGTCTAA TGTTATTAAA TATGTTAAAT AAACTTGATG GCGGTGCCAG CGTCGGGCTG
CTGGCGGAAC TCAGCGGCCT GCATCGCACC ACTGTGCGGC GACTGCTGGA GACGCTGCAG
GAAGAGGGAT ATGTCCGCCG TAGCCCCTCC GATGACAGTT TTCGTCTGAC CATCAAAGTG
CGGCAATTAA GCGAAGGATT TCGTGACGAA CAGTGGATTT CTGCACTGGC GGCCCCACTG
CTGGGCGATC TGTTGCGCGA AGTGGTATGG CCGACAGATG TGTCCACGCT GGATGTTGAT
GCAATGGTGG TACGCGAAAC CACCCACCGT TTCAGCCGCT TATCTTTTCA CCGGGCAATG
GTCGGGCGAC GTTTGCCGCT TCTGAAAACC GCCTCGGGCC TGACCTGGCT GGCCTTTTGC
CCGGAACAAG AACGCAAGGA ATTAATCGAG ATGTTAGCCT CCCGCCCCGG TGATGACTAT
CAACTGGCAC GAGAACCGTT AAAGCTGCAA GCCATTCTGG CGCGCGCGCG CAAAGAGGGT
TACGGACAGA ACTACCGCGG CTGGGATCAG GAGGAGAAGA TCGCCTCTAT CGCCGTACCG
CTGCGCAGTG AACAACGGGT GATTGGCTGT CTGAATCTGG TGTATATGGC GAGCGCAATG
ACCATTGAAC AGGCCGCGGA AAAGCATCTT CCGGCGCTAC AACGGGTAGC AAAACAGATC
GAAGAAGGGG TTGAATCGCA GGCTATTCTG GTAGCCGGAA GGCGAAGCGG CGTGCATTTA
CGTTGA
 
Protein sequence
MSINMQNNEQ TEYKTVRGLT RGLMLLNMLN KLDGGASVGL LAELSGLHRT TVRRLLETLQ 
EEGYVRRSPS DDSFRLTIKV RQLSEGFRDE QWISALAAPL LGDLLREVVW PTDVSTLDVD
AMVVRETTHR FSRLSFHRAM VGRRLPLLKT ASGLTWLAFC PEQERKELIE MLASRPGDDY
QLAREPLKLQ AILARARKEG YGQNYRGWDQ EEKIASIAVP LRSEQRVIGC LNLVYMASAM
TIEQAAEKHL PALQRVAKQI EEGVESQAIL VAGRRSGVHL R