Gene EcolC_3171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3171 
Symbol 
ID6065639 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3474876 
End bp3475573 
Gene Length698 bp 
Protein Length232 aa 
Translation table11 
GC content53% 
IMG OID641602587 
Productinsertion element protein 
Protein accessionYP_001726121 
Protein GI170021167 
COG category[L] Replication, recombination and repair 
COG ID[COG1662] Transposase and inactivated derivatives, IS1 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.22651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTTCCA TTTCCATCAG ATGTCCTTCC TGCTCCGCTA CTGAAGGCGT GGTGCGTAAC 
GGCAAAAGCA CTGCCGGGCA TCAGCGCTAT CTCTGCTCTC ATTGCCGTAA AACATGGCAA
CTACAGTTCA CTTACACCGC CTCTCAGCCC GGTACGCACC AGAAAATCAT TGATATGGCC
ATGAATGGCG TCGGATGTCG CGCCAGTGCA CGCATTATGG GCGTTGGCCT CAACACGGTT
TTACGTCACT TAAAAAACTC AGGCCGCAGT CGGTAACCTC GCGCATACAA CCGGGCAGTG
ATGTGATTGT CTGCGCTGAA ATGGACGAAC AGTGGGGCTA CGTCGGTGCT AAATCACGTC
AGCGCTGGCT GTTTTACGCG TATGACAGGA TACGGAGGAC GGTTGTGGCG CACGTCTTCG
GTGAACGCAC TCTGGCCACA CTGGAGTGTC TTCTGAGCCT GCTGTCGGCC TTTGAGGTCG
TGGTATGGAT GACGGATGGC TGGCCGCTGT ATGAATCCCG CCTGAAGGGA AAGCTGCACG
TTATCAGCAA GCGTTACACT CAGCGCATTG AGCGACATAA CCTGAATCTG AGACAACATC
TGGCAAGGCT GGGACGGAAG TCACTGTCGT TCTCAAAATC GGTGGAGCTG CATGACAAGG
TCATCGGGCA TTATCTGAAC ATAAAACACT ATCAGTAA
 
Protein sequence
MASISIRCPS CSATEGVVRN GKSTAGHQRY LCSHCRKTWQ LQFTYTASQP GTHQKIIDMA 
MNGVGCRASA RIMGVGLNTV LRHLKKLRPQ SVTSRIQPGS DVIVCAEMDE QWGYVGAKSR
QRWLFYAYDR IRRTVVAHVF GERTLATLEC LLSLLSAFEV VVWMTDGWPL YESRLKGKLH
VISKRYTQRI ERHNLNLRQH LARLGRKSLS FSKSVELHDK VIGHYLNIKH YQ