Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3171 |
Symbol | |
ID | 6065639 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 3474876 |
End bp | 3475573 |
Gene Length | 698 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641602587 |
Product | insertion element protein |
Protein accession | YP_001726121 |
Protein GI | 170021167 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1662] Transposase and inactivated derivatives, IS1 family |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.22651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTTCCA TTTCCATCAG ATGTCCTTCC TGCTCCGCTA CTGAAGGCGT GGTGCGTAAC GGCAAAAGCA CTGCCGGGCA TCAGCGCTAT CTCTGCTCTC ATTGCCGTAA AACATGGCAA CTACAGTTCA CTTACACCGC CTCTCAGCCC GGTACGCACC AGAAAATCAT TGATATGGCC ATGAATGGCG TCGGATGTCG CGCCAGTGCA CGCATTATGG GCGTTGGCCT CAACACGGTT TTACGTCACT TAAAAAACTC AGGCCGCAGT CGGTAACCTC GCGCATACAA CCGGGCAGTG ATGTGATTGT CTGCGCTGAA ATGGACGAAC AGTGGGGCTA CGTCGGTGCT AAATCACGTC AGCGCTGGCT GTTTTACGCG TATGACAGGA TACGGAGGAC GGTTGTGGCG CACGTCTTCG GTGAACGCAC TCTGGCCACA CTGGAGTGTC TTCTGAGCCT GCTGTCGGCC TTTGAGGTCG TGGTATGGAT GACGGATGGC TGGCCGCTGT ATGAATCCCG CCTGAAGGGA AAGCTGCACG TTATCAGCAA GCGTTACACT CAGCGCATTG AGCGACATAA CCTGAATCTG AGACAACATC TGGCAAGGCT GGGACGGAAG TCACTGTCGT TCTCAAAATC GGTGGAGCTG CATGACAAGG TCATCGGGCA TTATCTGAAC ATAAAACACT ATCAGTAA
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Protein sequence | MASISIRCPS CSATEGVVRN GKSTAGHQRY LCSHCRKTWQ LQFTYTASQP GTHQKIIDMA MNGVGCRASA RIMGVGLNTV LRHLKKLRPQ SVTSRIQPGS DVIVCAEMDE QWGYVGAKSR QRWLFYAYDR IRRTVVAHVF GERTLATLEC LLSLLSAFEV VVWMTDGWPL YESRLKGKLH VISKRYTQRI ERHNLNLRQH LARLGRKSLS FSKSVELHDK VIGHYLNIKH YQ
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