Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_3154 |
Symbol | |
ID | 6066489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 3457157 |
End bp | 3460306 |
Gene Length | 3150 bp |
Protein Length | 1049 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641602570 |
Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
Protein accession | YP_001726104 |
Protein GI | 170021150 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAATT TCTTTATCGA TCGCCCGATT TTTGCGTGGG TGATCGCCAT TATCATCATG TTGGCAGGGG GGCTGGCGAT CCTCAAACTG CCGGTGGCGC AATATCCTAC GATTGCACCG CCGGCAGTAA CGATCTCCGC CTCCTACCCC GGCGCTGATG CGAAAACAGT GCAGGACACG GTGACACAGG TTATCGAACA GAATATGAAC GGTATCGATA ACCTGATGTA CATGTCCTCT AACAGTGACT CCACGGGTAC CGTGCAGATC ACCCTGACCT TTGAGTCTGG TACTGATGCG GATATCGCGC AGGTTCAGGT GCAGAACAAA CTGCAGCTGG CGATGCCGTT GCTGCCGCAA GAAGTTCAGC AGCAAGGGGT GAGCGTTGAG AAATCATCCA GCAGCTTCCT GATGGTTGTC GGCGTTATCA ACACCGATGG CACCATGACG CAGGAGGATA TCTCCGACTA CGTGGCGGCG AATATGAAAG ATGCCATCAG CCGTACGTCG GGCGTGGGTG ATGTTCAGTT GTTCGGTTCA CAGTACGCGA TGCGTATCTG GATGAACCCG AATGAGCTGA ACAAATTCCA GCTAACGCCG GTTGATGTCA TTACCGCCAT CAAAGCGCAG AACGCCCAGG TTGCGGCGGG TCAGCTCGGT GGTACGCCGC CGGTGAAAGG CCAACAGCTT AACGCCTCTA TTATTGCTCA GACGCGTCTG ACCTCTACTG AAGAGTTCGG CAAAATCCTG CTGAAAGTGA ATCAGGATGG TTCCCGCGTG CTGCTGCGTG ACGTCGCGAA GATTGAGCTG GGTGGTGAGA ACTACGACAT CATCGCAGAG TTTAACGGCC AACCGGCTTC CGGTCTGGGG ATCAAGCTGG CGACCGGTGC AAACGCGCTG GATACCGCTG CGGCAATCCG TGCTGAACTG GCGAAGATGG AACCGTTCTT CCCGTCGGGT CTGAAAATTG TTTACCCATA CGACACCACG CCGTTCGTGA AAATCTCTAT TCACGAAGTG GTTAAAACGC TGGTCGAAGC GATCATCCTC GTGTTCCTGG TTATGTATCT GTTCCTGCAG AACTTCCGCG CGACGTTGAT TCCGACCATT GCCGTACCGG TGGTATTGCT CGGGACCTTT GCCGTCCTTG CCGCCTTTGG CTTCTCGATA AACACGCTAA CAATGTTCGG GATGGTGCTC GCCATCGGCC TGTTGGTGGA TGACGCCATC GTTGTGGTAG AAAACGTTGA GCGTGTTATG GCGGAAGAAG GTTTGCCGCC AAAAGAAGCT ACCCGTAAGT CGATGGGGCA GATTCAGGGC GCTCTGGTCG GTATCGCGAT GGTACTGTCG GCGGTATTCG TACCGATGGC CTTCTTTGGC GGTTCTACTG GTGCTATCTA TCGTCAGTTC TCTATTACCA TTGTTTCAGC AATGGCGCTG TCGGTACTGG TGGCGTTGAT CCTGACTCCA GCTCTTTGTG CCACCATGCT GAAACCGATT GCCAAAGGCG ATCACGGGGA AGGTAAAAAA GGCTTCTTCG GCTGGTTTAA CCGCATGTTC GAGAAGAGCA CGCACCACTA CACCGACAGC GTAGGCGGTA TTCTGCGCAG TACGGGGCGT TACCTGGTGC TGTATCTGAT CATCGTGGTC GGCATGGCCT ATCTGTTCGT GCGTCTGCCA AGCTCCTTCT TGCCAGATGA GGACCAGGGC GTGTTTATGA CCATGGTTCA GCTGCCAGCA GGTGCAACGC AGGAACGTAC ACAGAAAGTG CTCAATGAGG TAACGCATTA CTATCTGACC AAAGAAAAGA ACAACGTTGA GTCGGTGTTC GCCGTTAACG GCTTCGGCTT TGCGGGACGT GGTCAGAATA CCGGTATTGC GTTCGTTTCC TTGAAGGACT GGGCCGATCG TCCGGGCGAA GAAAACAAAG TTGAAGCGAT TACCATGCGT GCAACACGCG CTTTCTCGCA AATCAAAGAT GCGATGGTTT TCGCCTTTAA CCTGCCCGCA ATCGTGGAAC TGGGTACTGC AACCGGCTTT GACTTTGAGC TGATTGACCA GGCTGGCCTT GGTCACGAAA AACTGACTCA GGCGCGTAAC CAGTTGCTTG CAGAAGCAGC GAAGCACCCT GATATGTTGA CCAGCGTACG TCCAAACGGT CTGGAAGATA CCCCGCAGTT TAAGATTGAT ATCGACCAGG AAAAAGCGCA GGCGCTGGGT GTTTCTATCA ACGACATTAA CACCACTCTG GGCGCTGCAT GGGGCGGCAG CTATGTGAAC GACTTTATCG ACCGCGGTCG TGTGAAGAAA GTTTATGTCA TGTCAGAAGC GAAATACCGT ATGCTGCCGG ATGATATCGG CGACTGGTAT GTTCGTGCTG CTGATGGTCA GATGGTGCCA TTCTCGGCGT TCTCCTCTTC TCGTTGGGAG TACGGTTCGC CGCGTCTGGA ACGTTACAAC GGCCTGCCAT CCATGGAAAT CTTAGGCCAG GCGGCACCGG GTAAAAGTAC CGGTGAAGCA ATGGAGCTGA TGGAACAACT GGCGAGCAAA CTGCCTACCG GTGTTGGCTA TGACTGGACG GGGATGTCCT ATCAGGAACG TCTCTCCGGC AACCAGGCAC CTTCACTGTA CGCGATTTCG TTGATTGTCG TGTTCCTGTG TCTGGCGGCG CTGTACGAGA GCTGGTCGAT TCCGTTCTCC GTTATGCTGG TCGTTCCGCT GGGGGTTATC GGTGCGTTGC TGGCTGCCAC CTTCCGTGGC CTGACCAATG ACGTTTACTT CCAGGTAGGC CTGCTCACAA CCATTGGGTT GTCGGCGAAG AACGCGATCC TTATCGTCGA ATTCGCCAAA GACTTGATGG ATAAAGAAGG TAAAGGTCTG ATTGAAGCGA CGCTTGATGC GGTGCGGATG CGTTTACGTC CGATCCTGAT GACCTCGCTG GCGTTTATCC TCGGCGTTAT GCCGCTGGTT ATCAGTACTG GTGCTGGTTC CGGCGCGCAG AACGCAGTAG GTACCGGTGT AATGGGCGGG ATGGTGACCG CAACGGTACT GGCAATCTTC TTCGTTCCGG TATTCTTTGT GGTGGTTCGC CGCCGCTTTA GCCGCAAGAA TGAAGATATC GAGCACAGCC ATACTGTCGA TCATCATTGA
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Protein sequence | MPNFFIDRPI FAWVIAIIIM LAGGLAILKL PVAQYPTIAP PAVTISASYP GADAKTVQDT VTQVIEQNMN GIDNLMYMSS NSDSTGTVQI TLTFESGTDA DIAQVQVQNK LQLAMPLLPQ EVQQQGVSVE KSSSSFLMVV GVINTDGTMT QEDISDYVAA NMKDAISRTS GVGDVQLFGS QYAMRIWMNP NELNKFQLTP VDVITAIKAQ NAQVAAGQLG GTPPVKGQQL NASIIAQTRL TSTEEFGKIL LKVNQDGSRV LLRDVAKIEL GGENYDIIAE FNGQPASGLG IKLATGANAL DTAAAIRAEL AKMEPFFPSG LKIVYPYDTT PFVKISIHEV VKTLVEAIIL VFLVMYLFLQ NFRATLIPTI AVPVVLLGTF AVLAAFGFSI NTLTMFGMVL AIGLLVDDAI VVVENVERVM AEEGLPPKEA TRKSMGQIQG ALVGIAMVLS AVFVPMAFFG GSTGAIYRQF SITIVSAMAL SVLVALILTP ALCATMLKPI AKGDHGEGKK GFFGWFNRMF EKSTHHYTDS VGGILRSTGR YLVLYLIIVV GMAYLFVRLP SSFLPDEDQG VFMTMVQLPA GATQERTQKV LNEVTHYYLT KEKNNVESVF AVNGFGFAGR GQNTGIAFVS LKDWADRPGE ENKVEAITMR ATRAFSQIKD AMVFAFNLPA IVELGTATGF DFELIDQAGL GHEKLTQARN QLLAEAAKHP DMLTSVRPNG LEDTPQFKID IDQEKAQALG VSINDINTTL GAAWGGSYVN DFIDRGRVKK VYVMSEAKYR MLPDDIGDWY VRAADGQMVP FSAFSSSRWE YGSPRLERYN GLPSMEILGQ AAPGKSTGEA MELMEQLASK LPTGVGYDWT GMSYQERLSG NQAPSLYAIS LIVVFLCLAA LYESWSIPFS VMLVVPLGVI GALLAATFRG LTNDVYFQVG LLTTIGLSAK NAILIVEFAK DLMDKEGKGL IEATLDAVRM RLRPILMTSL AFILGVMPLV ISTGAGSGAQ NAVGTGVMGG MVTATVLAIF FVPVFFVVVR RRFSRKNEDI EHSHTVDHH
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